Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10189130-10591735

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fads1 19 10182888 to 10196870 13982 + protein coding gene fatty acid desaturase 1
Mir6993 19 10191375 to 10191439 64 + miRNA gene microRNA 6993
Tssr155035 19 10193757 to 10193771 14 + TSS region transcription start site region 155035
Tssr155036 19 10195234 to 10195257 23 + TSS region transcription start site region 155036
Gm10143 19 10198368 to 10202384 4016 + unclassified non-coding RNA gene predicted gene 10143
Fen1 19 10199132 to 10204169 5037 - protein coding gene flap structure specific endonuclease 1
Cpgi10601 19 10203594 to 10204473 879 CpG island CpG island 10601
Tssr158165 19 10203856 to 10203870 14 - TSS region transcription start site region 158165
Tssr158166 19 10203880 to 10203948 68 - TSS region transcription start site region 158166
Tssr155037 19 10204180 to 10204191 11 + TSS region transcription start site region 155037
Tssr155038 19 10204201 to 10204237 36 + TSS region transcription start site region 155038
Tmem258 19 10204202 to 10207824 3622 + protein coding gene transmembrane protein 258
Tssr155039 19 10204238 to 10204249 11 + TSS region transcription start site region 155039
Tssr158167 19 10204390 to 10204413 23 - TSS region transcription start site region 158167
Tssr155040 19 10206460 to 10206479 19 + TSS region transcription start site region 155040
Myrf 19 10208272 to 10240748 32476 - protein coding gene myelin regulatory factor
Tssr158168 19 10223566 to 10223572 6 - TSS region transcription start site region 158168
Cpgi10602 19 10225193 to 10225426 233 CpG island CpG island 10602
Tssr158169 19 10225247 to 10225262 15 - TSS region transcription start site region 158169
Tssr158170 19 10228771 to 10228793 22 - TSS region transcription start site region 158170
Tssr158171 19 10231040 to 10231052 12 - TSS region transcription start site region 158171
Tssr158172 19 10237959 to 10237972 13 - TSS region transcription start site region 158172
Tssr158173 19 10237973 to 10237984 11 - TSS region transcription start site region 158173
Cpgi10603 19 10240038 to 10241128 1090 CpG island CpG island 10603
Tssr158174 19 10240689 to 10240751 62 - TSS region transcription start site region 158174
Tssr158175 19 10240762 to 10240776 14 - TSS region transcription start site region 158175
D19Mit115 19 10242776 to 10242893 117 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 115
Dagla 19 10245265 to 10304877 59612 - protein coding gene diacylglycerol lipase, alpha
Tssr158176 19 10272930 to 10272933 3 - TSS region transcription start site region 158176
Cpgi10604 19 10277395 to 10277598 203 CpG island CpG island 10604
Gm30042 19 10290223 to 10296440 6217 + lncRNA gene predicted gene, 30042
Cpgi10605 19 10304272 to 10305563 1291 CpG island CpG island 10605
Tssr158177 19 10304854 to 10304865 11 - TSS region transcription start site region 158177
Tssr158178 19 10304867 to 10304954 87 - TSS region transcription start site region 158178
Gm30263 19 10362065 to 10366277 4212 - lncRNA gene predicted gene, 30263
Cpgi10606 19 10388450 to 10390097 1647 CpG island CpG island 10606
Tssr155041 19 10388999 to 10389063 64 + TSS region transcription start site region 155041
Tssr155042 19 10389068 to 10389084 16 + TSS region transcription start site region 155042
Tssr5443 19 10389086 to 10389100 14 + TSS region transcription start site region 5443
Syt7 19 10389090 to 10453181 64091 + protein coding gene synaptotagmin VII
Gm26859 19 10389130 to 10391735 2605 - lincRNA gene predicted gene, 26859
Tssr155043 19 10389205 to 10389214 9 + TSS region transcription start site region 155043
Tssr155044 19 10389218 to 10389233 15 + TSS region transcription start site region 155044
Tssr155045 19 10389236 to 10389259 23 + TSS region transcription start site region 155045
Tssr155046 19 10389270 to 10389291 21 + TSS region transcription start site region 155046
Tssr155047 19 10389386 to 10389441 55 + TSS region transcription start site region 155047
Tssr155048 19 10403981 to 10403996 15 + TSS region transcription start site region 155048
Cpgi10607 19 10422128 to 10422527 399 CpG island CpG island 10607
Cpgi10608 19 10422528 to 10423119 591 CpG island CpG island 10608
Tssr155049 19 10426023 to 10426034 11 + TSS region transcription start site region 155049
Tssr155050 19 10426144 to 10426157 13 + TSS region transcription start site region 155050
Cpgi10609 19 10426152 to 10426544 392 CpG island CpG island 10609
Tssr155051 19 10435190 to 10435206 16 + TSS region transcription start site region 155051
Lrrc10b 19 10455371 to 10457447 2076 - protein coding gene leucine rich repeat containing 10B
Cpgi10610 19 10456225 to 10458079 1854 CpG island CpG island 10610
Tssr158179 19 10457545 to 10457557 12 - TSS region transcription start site region 158179
Tssr158180 19 10457565 to 10457584 19 - TSS region transcription start site region 158180
Tssr158181 19 10461434 to 10461437 3 - TSS region transcription start site region 158181
Tssr158182 19 10462277 to 10462287 10 - TSS region transcription start site region 158182
Tssr158183 19 10462307 to 10462312 5 - TSS region transcription start site region 158183
Ppp1r32 19 10474257 to 10482897 8640 - protein coding gene protein phosphatase 1, regulatory subunit 32
Tssr158184 19 10482669 to 10482708 39 - TSS region transcription start site region 158184
Tssr158185 19 10482874 to 10482938 64 - TSS region transcription start site region 158185
Sdhaf2 19 10500513 to 10525209 24696 - protein coding gene succinate dehydrogenase complex assembly factor 2
Cpgi10611 19 10524679 to 10525920 1241 CpG island CpG island 10611
Tssr158186 19 10525104 to 10525150 46 - TSS region transcription start site region 158186
Tssr158187 19 10525151 to 10525181 30 - TSS region transcription start site region 158187
Tssr158188 19 10525182 to 10525197 15 - TSS region transcription start site region 158188
Tssr158189 19 10525201 to 10525214 13 - TSS region transcription start site region 158189
Cpsf7 19 10525244 to 10547735 22491 + protein coding gene cleavage and polyadenylation specific factor 7
Tssr155052 19 10525250 to 10525305 55 + TSS region transcription start site region 155052
Tssr155053 19 10525315 to 10525326 11 + TSS region transcription start site region 155053
Tssr155054 19 10525584 to 10525605 21 + TSS region transcription start site region 155054
Tssr158190 19 10525701 to 10525732 31 - TSS region transcription start site region 158190
Tssr155055 19 10535435 to 10535444 9 + TSS region transcription start site region 155055
Tmem216 19 10539403 to 10556303 16900 - protein coding gene transmembrane protein 216
Tssr158191 19 10554790 to 10554834 44 - TSS region transcription start site region 158191
Tssr155056 19 10554964 to 10554973 9 + TSS region transcription start site region 155056
Cpgi10612 19 10555594 to 10556205 611 CpG island CpG island 10612
Tssr158192 19 10555724 to 10555761 37 - TSS region transcription start site region 158192
Tssr5444 19 10555762 to 10555782 20 - TSS region transcription start site region 5444
Tssr158193 19 10555808 to 10555814 6 - TSS region transcription start site region 158193
Tssr158194 19 10556198 to 10556275 77 - TSS region transcription start site region 158194
Tmem138 19 10570478 to 10577362 6884 - protein coding gene transmembrane protein 138
Cpgi10613 19 10576811 to 10577782 971 CpG island CpG island 10613
Tssr158195 19 10577053 to 10577095 42 - TSS region transcription start site region 158195
Tssr158196 19 10577098 to 10577120 22 - TSS region transcription start site region 158196
Tssr155057 19 10577147 to 10577175 28 + TSS region transcription start site region 155057
Tssr155058 19 10577180 to 10577196 16 + TSS region transcription start site region 155058
Tssr158197 19 10577367 to 10577407 40 - TSS region transcription start site region 158197
Tssr155059 19 10577439 to 10577461 22 + TSS region transcription start site region 155059
Cyb561a3 19 10577454 to 10588548 11094 + protein coding gene cytochrome b561 family, member A3
Tssr155060 19 10577464 to 10577475 11 + TSS region transcription start site region 155060
Tssr155061 19 10577481 to 10577492 11 + TSS region transcription start site region 155061
Tssr155062 19 10582184 to 10582207 23 + TSS region transcription start site region 155062
Tssr155063 19 10582221 to 10582252 31 + TSS region transcription start site region 155063
Tssr155064 19 10582270 to 10582280 10 + TSS region transcription start site region 155064
Tssr155065 19 10582281 to 10582313 32 + TSS region transcription start site region 155065
Tssr155066 19 10582315 to 10582325 10 + TSS region transcription start site region 155066
Tssr155067 19 10589109 to 10589119 10 + TSS region transcription start site region 155067