MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:80724141-80944058

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Atp9b	18	80734141 to 80934058	199917	-	protein coding gene	ATPase, class II, type 9B
Tssr154046	18	80738301 to 80738311	10	-	TSS region	transcription start site region 154046
Tssr154047	18	80743000 to 80743008	8	-	TSS region	transcription start site region 154047
Tssr154048	18	80743010 to 80743026	16	-	TSS region	transcription start site region 154048
Tssr154049	18	80743033 to 80743040	7	-	TSS region	transcription start site region 154049
Tssr154050	18	80743049 to 80743061	12	-	TSS region	transcription start site region 154050
Tssr5386	18	80791048 to 80791049	1	+	TSS region	transcription start site region 5386
Gm47272	18	80822247 to 80838491	16244	+	antisense lncRNA gene	predicted gene, 47272
Gm47273	18	80854309 to 80854727	418	+	pseudogene	predicted gene, 47273
Tssr154051	18	80860914 to 80860922	8	-	TSS region	transcription start site region 154051
Tssr154052	18	80860936 to 80860952	16	-	TSS region	transcription start site region 154052
Tssr154053	18	80860954 to 80860963	9	-	TSS region	transcription start site region 154053
Tssr154054	18	80869685 to 80869689	4	-	TSS region	transcription start site region 154054
Tssr154055	18	80901405 to 80901409	4	-	TSS region	transcription start site region 154055
Gm25071	18	80925736 to 80925805	69	-	miRNA gene	predicted gene, 25071
Cpgi10310	18	80933379 to 80934370	991		CpG island	CpG island 10310
Tssr154056	18	80933973 to 80934045	72	-	TSS region	transcription start site region 154056
Tssr154057	18	80934054 to 80934077	23	-	TSS region	transcription start site region 154057