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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:80709141-80959058

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nfatc1 18 80606205 to 80713071 106866 - protein coding gene nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
Cpgi10308 18 80712085 to 80713978 1893 CpG island CpG island 10308
Tssr154044 18 80713062 to 80713080 18 - TSS region transcription start site region 154044
Tssr154045 18 80713571 to 80713590 19 - TSS region transcription start site region 154045
Cpgi10309 18 80714256 to 80715671 1415 CpG island CpG island 10309
Tssr152122 18 80715074 to 80715088 14 + TSS region transcription start site region 152122
Tssr152123 18 80715371 to 80715382 11 + TSS region transcription start site region 152123
Atp9b 18 80734141 to 80934058 199917 - protein coding gene ATPase, class II, type 9B
Tssr154046 18 80738301 to 80738311 10 - TSS region transcription start site region 154046
Tssr154047 18 80743000 to 80743008 8 - TSS region transcription start site region 154047
Tssr154048 18 80743010 to 80743026 16 - TSS region transcription start site region 154048
Tssr154049 18 80743033 to 80743040 7 - TSS region transcription start site region 154049
Tssr154050 18 80743049 to 80743061 12 - TSS region transcription start site region 154050
Tssr5386 18 80791048 to 80791049 1 + TSS region transcription start site region 5386
Gm47272 18 80822247 to 80838491 16244 + antisense lncRNA gene predicted gene, 47272
Gm47273 18 80854309 to 80854727 418 + pseudogene predicted gene, 47273
Tssr154051 18 80860914 to 80860922 8 - TSS region transcription start site region 154051
Tssr154052 18 80860936 to 80860952 16 - TSS region transcription start site region 154052
Tssr154053 18 80860954 to 80860963 9 - TSS region transcription start site region 154053
Tssr154054 18 80869685 to 80869689 4 - TSS region transcription start site region 154054
Tssr154055 18 80901405 to 80901409 4 - TSS region transcription start site region 154055
Gm25071 18 80925736 to 80925805 69 - miRNA gene predicted gene, 25071
Cpgi10310 18 80933379 to 80934370 991 CpG island CpG island 10310
Tssr154056 18 80933973 to 80934045 72 - TSS region transcription start site region 154056
Tssr154057 18 80934054 to 80934077 23 - TSS region transcription start site region 154057