Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:6983736-7763740

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mkx 18 6934966 to 7004779 69813 - protein coding gene mohawk homeobox
Cpgi9681 18 7000569 to 7000748 179 CpG island CpG island 9681
Cpgi9682 18 7001452 to 7002715 1263 CpG island CpG island 9682
Cpgi9683 18 7003380 to 7005403 2023 CpG island CpG island 9683
Tssr152368 18 7004717 to 7004733 16 - TSS region transcription start site region 152368
Gm46633 18 7004963 to 7006405 1442 + lncRNA gene predicted gene, 46633
Gm10350 18 7043909 to 7044135 226 - pseudogene predicted gene 10350
Armc4 18 7088209 to 7297936 209727 - protein coding gene armadillo repeat containing 4
Gm18581 18 7107181 to 7108183 1002 - pseudogene predicted gene, 18581
D18Mit18 18 7116121 to 7116255 134 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 18
4930415O11Rik 18 7150343 to 7151776 1433 unclassified gene RIKEN cDNA 4930415O11 gene
Tssr152369 18 7273578 to 7273587 9 - TSS region transcription start site region 152369
Tssr152370 18 7297064 to 7297072 8 - TSS region transcription start site region 152370
Cpgi9684 18 7297759 to 7298044 285 CpG island CpG island 9684
Gm34979 18 7332445 to 7346299 13854 - lncRNA gene predicted gene, 34979
Tssr152371 18 7346010 to 7346014 4 - TSS region transcription start site region 152371
Mpp7 18 7347959 to 7626866 278907 - protein coding gene membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
Tssr152372 18 7373736 to 7373740 4 - TSS region transcription start site region 152372
D18Mit168 18 7464450 to 7464545 95 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 168
Gm18948 18 7548987 to 7549581 594 + pseudogene predicted gene, 18948
Fabp5l2 18 7581516 to 7581920 404 + pseudogene fatty acid binding protein 5-like 2
Tssr152373 18 7583781 to 7583788 7 - TSS region transcription start site region 152373
Tssr5241 18 7585699 to 7585706 7 + TSS region transcription start site region 5241
Tssr152374 18 7608331 to 7608335 4 - TSS region transcription start site region 152374
Cpgi9685 18 7608679 to 7608967 288 CpG island CpG island 9685
Tssr152375 18 7610599 to 7610604 5 - TSS region transcription start site region 152375
Tssr149977 18 7613980 to 7613990 10 + TSS region transcription start site region 149977
Cpgi9686 18 7626159 to 7627213 1054 CpG island CpG island 9686
Tssr152376 18 7626777 to 7626792 15 - TSS region transcription start site region 152376
Tssr152377 18 7626809 to 7626880 71 - TSS region transcription start site region 152377
Gm18763 18 7684530 to 7692726 8196 - pseudogene predicted gene, 18763
Cpgi9687 18 7692737 to 7693448 711 CpG island CpG island 9687
Tssr152378 18 7703655 to 7703659 4 - TSS region transcription start site region 152378
D18Mit167 18 7756397 to 7756498 101 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 167