Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:58839630-60319735

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adamts19 18 58836764 to 59053678 216914 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19
Gm18088 18 58930184 to 58931119 935 - pseudogene predicted gene, 18088
2610317O13Rik 18 58963573 to 58964689 1116 unclassified gene RIKEN cDNA 2610317O13 gene
Minar2 18 59062248 to 59076962 14714 + protein coding gene membrane integral NOTCH2 associated receptor 2
Tssr5340 18 59062312 to 59062338 26 + TSS region transcription start site region 5340
Tssr151231 18 59062344 to 59062376 32 + TSS region transcription start site region 151231
Tssr151232 18 59062379 to 59062389 10 + TSS region transcription start site region 151232
Tssr151233 18 59062488 to 59062538 50 + TSS region transcription start site region 151233
Tssr151234 18 59063689 to 59063700 11 + TSS region transcription start site region 151234
Tssr151235 18 59075588 to 59075599 11 + TSS region transcription start site region 151235
Cpgi10086 18 59174664 to 59176801 2137 CpG island CpG island 10086
Tssr151236 18 59175333 to 59175406 73 + TSS region transcription start site region 151236
Chsy3 18 59175401 to 59410446 235045 + protein coding gene chondroitin sulfate synthase 3
Tssr151237 18 59175408 to 59175463 55 + TSS region transcription start site region 151237
Tssr151238 18 59175472 to 59175493 21 + TSS region transcription start site region 151238
Cpgi10087 18 59179432 to 59179678 246 CpG island CpG island 10087
Tssr151239 18 59240022 to 59240025 3 + TSS region transcription start site region 151239
Gm19051 18 59245193 to 59245906 713 - pseudogene predicted gene, 19051
Cpgi10088 18 59408894 to 59409179 285 CpG island CpG island 10088
Mir6355 18 59579630 to 59579735 105 + miRNA gene microRNA 6355
Gm26028 18 59738064 to 59738357 293 - unclassified non-coding RNA gene predicted gene, 26028
Gm8697 18 59774108 to 59774471 363 - pseudogene predicted gene 8697
Tssr153428 18 59774499 to 59774502 3 - TSS region transcription start site region 153428
Gm38695 18 59825443 to 59843775 18332 - lncRNA gene predicted gene, 38695
Gm35234 18 59854569 to 59863934 9365 - lncRNA gene predicted gene, 35234
Gm41742 18 59865105 to 59876844 11739 - lncRNA gene predicted gene, 41742
Gm18217 18 59897577 to 59898087 510 + pseudogene predicted gene, 18217
Gm23576 18 60174317 to 60174426 109 + miRNA gene predicted gene, 23576
Hrtfm4 18 60178048 to 60178271 223 QTL heart failure modifier 4
D18Mit28 18 60178048 to 60178271 223 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 28
Gm18218 18 60185116 to 60185898 782 + pseudogene predicted gene, 18218
Tssr153429 18 60211551 to 60211562 11 - TSS region transcription start site region 153429
Tssr151240 18 60211970 to 60212033 63 + TSS region transcription start site region 151240
Gm4951 18 60212080 to 60247820 35740 + protein coding gene predicted gene 4951
Tssr151241 18 60212089 to 60212122 33 + TSS region transcription start site region 151241
Tssr151242 18 60212585 to 60212608 23 + TSS region transcription start site region 151242
Tssr151243 18 60213070 to 60213105 35 + TSS region transcription start site region 151243
Tssr151244 18 60213144 to 60213167 23 + TSS region transcription start site region 151244
Tssr151245 18 60214812 to 60214841 29 + TSS region transcription start site region 151245
Gm5970 18 60220843 to 60222058 1215 + pseudogene predicted gene 5970
Tssr151246 18 60222544 to 60222548 4 + TSS region transcription start site region 151246
Tssr151247 18 60223330 to 60223336 6 + TSS region transcription start site region 151247
Tssr151248 18 60226142 to 60226152 10 + TSS region transcription start site region 151248
Tssr151249 18 60229687 to 60229691 4 + TSS region transcription start site region 151249
Tssr151250 18 60231152 to 60231171 19 + TSS region transcription start site region 151250
Tssr151251 18 60235811 to 60235815 4 + TSS region transcription start site region 151251
Tssr153430 18 60238717 to 60238739 22 - TSS region transcription start site region 153430
Tssr151252 18 60238847 to 60238893 46 + TSS region transcription start site region 151252
Tssr151253 18 60238930 to 60238966 36 + TSS region transcription start site region 151253
Tssr151254 18 60242894 to 60242900 6 + TSS region transcription start site region 151254
Tssr151255 18 60246045 to 60246064 19 + TSS region transcription start site region 151255
Tssr151256 18 60246597 to 60246629 32 + TSS region transcription start site region 151256
Tssr151257 18 60246714 to 60246735 21 + TSS region transcription start site region 151257
Tssr151258 18 60247275 to 60247289 14 + TSS region transcription start site region 151258
Tssr151259 18 60247323 to 60247338 15 + TSS region transcription start site region 151259
Gm45947 18 60257185 to 60271350 14165 + lncRNA gene predicted gene, 45947
Gm4841 18 60268301 to 60273267 4966 - protein coding gene predicted gene 4841
Tssr153431 18 60269558 to 60269565 7 - TSS region transcription start site region 153431
Tssr153432 18 60269582 to 60269605 23 - TSS region transcription start site region 153432
Tssr153433 18 60269622 to 60269629 7 - TSS region transcription start site region 153433
Tssr153434 18 60269632 to 60269654 22 - TSS region transcription start site region 153434
Tssr153435 18 60269663 to 60269670 7 - TSS region transcription start site region 153435
Tssr153436 18 60269729 to 60269738 9 - TSS region transcription start site region 153436
Tssr153437 18 60269786 to 60269798 12 - TSS region transcription start site region 153437
Gm46635 18 60271379 to 60283874 12495 + lncRNA gene predicted gene, 46635
Tssr151260 18 60271490 to 60271497 7 + TSS region transcription start site region 151260
Tssr153438 18 60273266 to 60273277 11 - TSS region transcription start site region 153438
Tssr151261 18 60291333 to 60291345 12 + TSS region transcription start site region 151261
Tssr151262 18 60293372 to 60293387 15 + TSS region transcription start site region 151262
F830016B08Rik 18 60293380 to 60303016 9636 + protein coding gene RIKEN cDNA F830016B08 gene
Tssr151263 18 60300005 to 60300008 3 + TSS region transcription start site region 151263
Tssr151264 18 60300965 to 60300983 18 + TSS region transcription start site region 151264
Tssr151265 18 60301204 to 60301215 11 + TSS region transcription start site region 151265
Tssr151266 18 60303826 to 60303838 12 + TSS region transcription start site region 151266