Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:58774630-60384735

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D18Mit205 18 58786994 to 58787117 123 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 205
Cpgi10085 18 58835880 to 58838073 2193 CpG island CpG island 10085
Tssr151225 18 58836152 to 58836182 30 + TSS region transcription start site region 151225
Tssr151226 18 58836184 to 58836209 25 + TSS region transcription start site region 151226
Tssr151227 18 58836321 to 58836339 18 + TSS region transcription start site region 151227
Tssr151228 18 58836350 to 58836374 24 + TSS region transcription start site region 151228
Tssr151229 18 58836382 to 58836396 14 + TSS region transcription start site region 151229
Tssr151230 18 58836721 to 58836751 30 + TSS region transcription start site region 151230
Adamts19 18 58836764 to 59053678 216914 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19
Gm18088 18 58930184 to 58931119 935 - pseudogene predicted gene, 18088
2610317O13Rik 18 58963573 to 58964689 1116 unclassified gene RIKEN cDNA 2610317O13 gene
Minar2 18 59062248 to 59076962 14714 + protein coding gene membrane integral NOTCH2 associated receptor 2
Tssr5340 18 59062312 to 59062338 26 + TSS region transcription start site region 5340
Tssr151231 18 59062344 to 59062376 32 + TSS region transcription start site region 151231
Tssr151232 18 59062379 to 59062389 10 + TSS region transcription start site region 151232
Tssr151233 18 59062488 to 59062538 50 + TSS region transcription start site region 151233
Tssr151234 18 59063689 to 59063700 11 + TSS region transcription start site region 151234
Tssr151235 18 59075588 to 59075599 11 + TSS region transcription start site region 151235
Cpgi10086 18 59174664 to 59176801 2137 CpG island CpG island 10086
Tssr151236 18 59175333 to 59175406 73 + TSS region transcription start site region 151236
Chsy3 18 59175401 to 59410446 235045 + protein coding gene chondroitin sulfate synthase 3
Tssr151237 18 59175408 to 59175463 55 + TSS region transcription start site region 151237
Tssr151238 18 59175472 to 59175493 21 + TSS region transcription start site region 151238
Cpgi10087 18 59179432 to 59179678 246 CpG island CpG island 10087
Tssr151239 18 59240022 to 59240025 3 + TSS region transcription start site region 151239
Gm19051 18 59245193 to 59245906 713 - pseudogene predicted gene, 19051
Cpgi10088 18 59408894 to 59409179 285 CpG island CpG island 10088
Mir6355 18 59579630 to 59579735 105 + miRNA gene microRNA 6355
Gm26028 18 59738064 to 59738357 293 - unclassified non-coding RNA gene predicted gene, 26028
Gm8697 18 59774108 to 59774471 363 - pseudogene predicted gene 8697
Tssr153428 18 59774499 to 59774502 3 - TSS region transcription start site region 153428
Gm38695 18 59825443 to 59843775 18332 - lncRNA gene predicted gene, 38695
Gm35234 18 59854569 to 59863934 9365 - lncRNA gene predicted gene, 35234
Gm41742 18 59865105 to 59876844 11739 - lncRNA gene predicted gene, 41742
Gm18217 18 59897577 to 59898087 510 + pseudogene predicted gene, 18217
Gm23576 18 60174317 to 60174426 109 + miRNA gene predicted gene, 23576
Hrtfm4 18 60178048 to 60178271 223 QTL heart failure modifier 4
D18Mit28 18 60178048 to 60178271 223 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 28
Gm18218 18 60185116 to 60185898 782 + pseudogene predicted gene, 18218
Tssr153429 18 60211551 to 60211562 11 - TSS region transcription start site region 153429
Tssr151240 18 60211970 to 60212033 63 + TSS region transcription start site region 151240
Gm4951 18 60212080 to 60247820 35740 + protein coding gene predicted gene 4951
Tssr151241 18 60212089 to 60212122 33 + TSS region transcription start site region 151241
Tssr151242 18 60212585 to 60212608 23 + TSS region transcription start site region 151242
Tssr151243 18 60213070 to 60213105 35 + TSS region transcription start site region 151243
Tssr151244 18 60213144 to 60213167 23 + TSS region transcription start site region 151244
Tssr151245 18 60214812 to 60214841 29 + TSS region transcription start site region 151245
Gm5970 18 60220843 to 60222058 1215 + pseudogene predicted gene 5970
Tssr151246 18 60222544 to 60222548 4 + TSS region transcription start site region 151246
Tssr151247 18 60223330 to 60223336 6 + TSS region transcription start site region 151247
Tssr151248 18 60226142 to 60226152 10 + TSS region transcription start site region 151248
Tssr151249 18 60229687 to 60229691 4 + TSS region transcription start site region 151249
Tssr151250 18 60231152 to 60231171 19 + TSS region transcription start site region 151250
Tssr151251 18 60235811 to 60235815 4 + TSS region transcription start site region 151251
Tssr153430 18 60238717 to 60238739 22 - TSS region transcription start site region 153430
Tssr151252 18 60238847 to 60238893 46 + TSS region transcription start site region 151252
Tssr151253 18 60238930 to 60238966 36 + TSS region transcription start site region 151253
Tssr151254 18 60242894 to 60242900 6 + TSS region transcription start site region 151254
Tssr151255 18 60246045 to 60246064 19 + TSS region transcription start site region 151255
Tssr151256 18 60246597 to 60246629 32 + TSS region transcription start site region 151256
Tssr151257 18 60246714 to 60246735 21 + TSS region transcription start site region 151257
Tssr151258 18 60247275 to 60247289 14 + TSS region transcription start site region 151258
Tssr151259 18 60247323 to 60247338 15 + TSS region transcription start site region 151259
Gm45947 18 60257185 to 60271350 14165 + lncRNA gene predicted gene, 45947
Gm4841 18 60268301 to 60273267 4966 - protein coding gene predicted gene 4841
Tssr153431 18 60269558 to 60269565 7 - TSS region transcription start site region 153431
Tssr153432 18 60269582 to 60269605 23 - TSS region transcription start site region 153432
Tssr153433 18 60269622 to 60269629 7 - TSS region transcription start site region 153433
Tssr153434 18 60269632 to 60269654 22 - TSS region transcription start site region 153434
Tssr153435 18 60269663 to 60269670 7 - TSS region transcription start site region 153435
Tssr153436 18 60269729 to 60269738 9 - TSS region transcription start site region 153436
Tssr153437 18 60269786 to 60269798 12 - TSS region transcription start site region 153437
Gm46635 18 60271379 to 60283874 12495 + lncRNA gene predicted gene, 46635
Tssr151260 18 60271490 to 60271497 7 + TSS region transcription start site region 151260
Tssr153438 18 60273266 to 60273277 11 - TSS region transcription start site region 153438
Tssr151261 18 60291333 to 60291345 12 + TSS region transcription start site region 151261
Tssr151262 18 60293372 to 60293387 15 + TSS region transcription start site region 151262
F830016B08Rik 18 60293380 to 60303016 9636 + protein coding gene RIKEN cDNA F830016B08 gene
Tssr151263 18 60300005 to 60300008 3 + TSS region transcription start site region 151263
Tssr151264 18 60300965 to 60300983 18 + TSS region transcription start site region 151264
Tssr151265 18 60301204 to 60301215 11 + TSS region transcription start site region 151265
Tssr151266 18 60303826 to 60303838 12 + TSS region transcription start site region 151266
Gm46612 18 60324838 to 60326032 1194 + protein coding gene predicted gene, 46612
Tssr151267 18 60358606 to 60358610 4 + TSS region transcription start site region 151267
Gm8714 18 60361443 to 60362672 1229 + pseudogene predicted gene 8714
Tssr151268 18 60373607 to 60373624 17 + TSS region transcription start site region 151268
Iigp1 18 60376029 to 60392627 16598 + protein coding gene interferon inducible GTPase 1
Tssr151269 18 60376053 to 60376079 26 + TSS region transcription start site region 151269
Tssr151270 18 60376126 to 60376144 18 + TSS region transcription start site region 151270
Tssr151271 18 60376445 to 60376490 45 + TSS region transcription start site region 151271
Tssr151272 18 60376517 to 60376545 28 + TSS region transcription start site region 151272
Tssr151273 18 60376607 to 60376622 15 + TSS region transcription start site region 151273
Tssr151274 18 60379173 to 60379200 27 + TSS region transcription start site region 151274
Tssr151275 18 60379239 to 60379278 39 + TSS region transcription start site region 151275
Tssr151276 18 60379462 to 60379474 12 + TSS region transcription start site region 151276
Tssr151277 18 60382597 to 60382631 34 + TSS region transcription start site region 151277
Tssr151278 18 60382714 to 60382747 33 + TSS region transcription start site region 151278
Tssr151279 18 60383448 to 60383451 3 + TSS region transcription start site region 151279
Tssr151280 18 60383660 to 60383666 6 + TSS region transcription start site region 151280