Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:5680791-6094876

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zeb1 18 5591860 to 5775467 183607 + protein coding gene zinc finger E-box binding homeobox 1
Tssr149956 18 5688820 to 5688823 3 + TSS region transcription start site region 149956
Tssr5240 18 5721377 to 5721384 7 + TSS region transcription start site region 5240
Tssr149957 18 5772694 to 5772707 13 + TSS region transcription start site region 149957
Cpgi9674 18 5819722 to 5820132 410 CpG island CpG island 9674
Gm34740 18 5885791 to 5889876 4085 - lncRNA gene predicted gene, 34740
Gm34804 18 5956746 to 5966908 10162 + lncRNA gene predicted gene, 34804
D18Mit219 18 5976166 to 5976329 163 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 219
Cpgi9675 18 5989558 to 5990320 762 CpG island CpG island 9675
Gm41663 18 6004578 to 6015278 10700 + lncRNA gene predicted gene, 41663
Gm41662 18 6014254 to 6015021 767 - lncRNA gene predicted gene, 41662
Arhgap12 18 6024448 to 6136098 111650 - protein coding gene Rho GTPase activating protein 12
Gm19240 18 6029179 to 6030456 1277 - pseudogene predicted gene, 19240
Tssr152337 18 6039401 to 6039413 12 - TSS region transcription start site region 152337