Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:46514579-46718344

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fem1c 18 46504606 to 46525971 21365 - protein coding gene fem-1 homolog c (C.elegans)
Tssr150949 18 46515916 to 46515925 9 + TSS region transcription start site region 150949
Tssr153231 18 46522126 to 46522133 7 - TSS region transcription start site region 153231
Tssr153232 18 46522196 to 46522200 4 - TSS region transcription start site region 153232
Cpgi10022 18 46524357 to 46524635 278 CpG island CpG island 10022
Cpgi10023 18 46524965 to 46526534 1569 CpG island CpG island 10023
Tssr153233 18 46525017 to 46525052 35 - TSS region transcription start site region 153233
Tssr153234 18 46525077 to 46525086 9 - TSS region transcription start site region 153234
Tssr150950 18 46525152 to 46525192 40 + TSS region transcription start site region 150950
Tssr150951 18 46525199 to 46525232 33 + TSS region transcription start site region 150951
Tssr5309 18 46525336 to 46525365 29 - TSS region transcription start site region 5309
Tssr153235 18 46525751 to 46525764 13 - TSS region transcription start site region 153235
Tssr153236 18 46525772 to 46525783 11 - TSS region transcription start site region 153236
Tssr153237 18 46525851 to 46525871 20 - TSS region transcription start site region 153237
Tssr153238 18 46525940 to 46525999 59 - TSS region transcription start site region 153238
Tssr153239 18 46526002 to 46526009 7 - TSS region transcription start site region 153239
Tssr153240 18 46526022 to 46526027 5 - TSS region transcription start site region 153240
Tssr153241 18 46526035 to 46526046 11 - TSS region transcription start site region 153241
Tssr153242 18 46526048 to 46526055 7 - TSS region transcription start site region 153242
Bmd16 18 46534847 to 46534993 146 QTL bone mineral density 16
D18Mit36 18 46534847 to 46534993 146 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 36
Tssr153243 18 46557912 to 46557933 21 - TSS region transcription start site region 153243
Ticam2 18 46559155 to 46574533 15378 - protein coding gene toll-like receptor adaptor molecule 2
Tssr153244 18 46572928 to 46572941 13 - TSS region transcription start site region 153244
Tssr153245 18 46572945 to 46572957 12 - TSS region transcription start site region 153245
Tssr153246 18 46572958 to 46573000 42 - TSS region transcription start site region 153246
Cpgi10024 18 46573999 to 46574571 572 CpG island CpG island 10024
Tssr153247 18 46574300 to 46574311 11 - TSS region transcription start site region 153247
Tssr153248 18 46574319 to 46574328 9 - TSS region transcription start site region 153248
Tssr153249 18 46574451 to 46574462 11 - TSS region transcription start site region 153249
Tssr153250 18 46574469 to 46574488 19 - TSS region transcription start site region 153250
Tssr153251 18 46574491 to 46574503 12 - TSS region transcription start site region 153251
Tssr153252 18 46574504 to 46574518 14 - TSS region transcription start site region 153252
Gm18606 18 46575832 to 46576345 513 - pseudogene predicted gene, 18606
Tmed7 18 46585928 to 46597535 11607 - protein coding gene transmembrane p24 trafficking protein 7
Cpgi10025 18 46596991 to 46598368 1377 CpG island CpG island 10025
Tssr153253 18 46597299 to 46597347 48 - TSS region transcription start site region 153253
Tssr153254 18 46597459 to 46597470 11 - TSS region transcription start site region 153254
Tssr153255 18 46597480 to 46597543 63 - TSS region transcription start site region 153255
Tssr150952 18 46597698 to 46597765 67 + TSS region transcription start site region 150952
Eif1a 18 46597704 to 46610225 12521 + protein coding gene eukaryotic translation initiation factor 1A
Tssr150953 18 46598533 to 46598613 80 + TSS region transcription start site region 150953
Tssr150954 18 46598619 to 46598642 23 + TSS region transcription start site region 150954
Tssr150955 18 46601975 to 46601990 15 + TSS region transcription start site region 150955
Tssr150956 18 46609278 to 46609282 4 + TSS region transcription start site region 150956
Tssr153256 18 46612228 to 46612240 12 - TSS region transcription start site region 153256
Tssr153257 18 46613005 to 46613019 14 - TSS region transcription start site region 153257
Gm41719 18 46614579 to 46618344 3765 + lncRNA gene predicted gene, 41719
Gm3734 18 46630676 to 46641603 10927 + lncRNA gene predicted gene 3734
Tssr150957 18 46630908 to 46630914 6 + TSS region transcription start site region 150957
Tssr153258 18 46636328 to 46636333 5 - TSS region transcription start site region 153258
D18Mit56 18 46644294 to 46644544 250 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 56
Tssr153259 18 46673468 to 46673472 4 - TSS region transcription start site region 153259
Cdo1 18 46713193 to 46728395 15202 - protein coding gene cysteine dioxygenase 1, cytosolic
Tssr153260 18 46713409 to 46713412 3 - TSS region transcription start site region 153260
Tssr153261 18 46713569 to 46713572 3 - TSS region transcription start site region 153261
Tssr153262 18 46715732 to 46715750 18 - TSS region transcription start site region 153262
Tssr153263 18 46717094 to 46717117 23 - TSS region transcription start site region 153263