Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:46216429-46356500

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr150943 18 46226026 to 46226034 8 + TSS region transcription start site region 150943
Tssr150944 18 46227080 to 46227092 12 + TSS region transcription start site region 150944
Tssr153220 18 46237859 to 46237879 20 - TSS region transcription start site region 153220
Pggt1b 18 46239949 to 46280850 40901 - protein coding gene protein geranylgeranyltransferase type I, beta subunit
Cpgi10018 18 46280357 to 46280994 637 CpG island CpG island 10018
Tssr153221 18 46280820 to 46280841 21 - TSS region transcription start site region 153221
Ccdc112 18 46282151 to 46311928 29777 - protein coding gene coiled-coil domain containing 112
n-TTcgt1 18 46286429 to 46286500 71 - tRNA gene nuclear encoded tRNA threonine 1 (anticodon CGT)
Cpgi10019 18 46311347 to 46312161 814 CpG island CpG island 10019
Tssr153222 18 46311811 to 46311834 23 - TSS region transcription start site region 153222
Tssr153223 18 46311858 to 46311871 13 - TSS region transcription start site region 153223
Tssr153224 18 46311891 to 46311926 35 - TSS region transcription start site region 153224
Tssr150945 18 46337294 to 46337303 9 + TSS region transcription start site region 150945
4930415P13Rik 18 46339895 to 46340428 533 unclassified gene RIKEN cDNA 4930415P13 gene
Gm32288 18 46351446 to 46491048 139602 - lncRNA gene predicted gene, 32288
Gm4840 18 46355324 to 46356967 1643 - pseudogene predicted gene 4840