Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:43096613-43400551

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930572J10Rik 18 43038550 to 43171273 132723 lncRNA gene RIKEN cDNA 4930572J10 gene
Gm46622 18 43154736 to 43161986 7250 - lncRNA gene predicted gene, 46622
Gm8181 18 43171159 to 43171827 668 + pseudogene predicted gene 8181
Cpgi10001 18 43176235 to 43176471 236 CpG island CpG island 10001
Cpgi10002 18 43207444 to 43207906 462 CpG island CpG island 10002
Tssr150886 18 43207525 to 43207538 13 + TSS region transcription start site region 150886
Tssr150887 18 43207551 to 43207563 12 + TSS region transcription start site region 150887
Tssr150888 18 43207622 to 43207678 56 + TSS region transcription start site region 150888
Tssr150889 18 43207679 to 43207700 21 + TSS region transcription start site region 150889
Stk32a 18 43207697 to 43317481 109784 + protein coding gene serine/threonine kinase 32A
Tssr150890 18 43207710 to 43207721 11 + TSS region transcription start site region 150890
Tssr150891 18 43207724 to 43207737 13 + TSS region transcription start site region 150891
Gm31647 18 43246613 to 43250551 3938 - lncRNA gene predicted gene, 31647
Tssr150892 18 43265788 to 43265796 8 + TSS region transcription start site region 150892
Cpgi10003 18 43316688 to 43317154 466 CpG island CpG island 10003
Dpysl3 18 43320979 to 43438286 117307 - protein coding gene dihydropyrimidinase-like 3
Tssr153137 18 43321701 to 43321713 12 - TSS region transcription start site region 153137
Tssr153138 18 43322261 to 43322291 30 - TSS region transcription start site region 153138
Tssr153139 18 43322462 to 43322471 9 - TSS region transcription start site region 153139
Tssr153140 18 43322667 to 43322670 3 - TSS region transcription start site region 153140
Tssr153141 18 43323856 to 43323871 15 - TSS region transcription start site region 153141
Tssr153142 18 43324347 to 43324364 17 - TSS region transcription start site region 153142
Tssr153143 18 43325805 to 43325817 12 - TSS region transcription start site region 153143
Tssr153144 18 43328663 to 43328667 4 - TSS region transcription start site region 153144
Tssr153145 18 43345144 to 43345156 12 - TSS region transcription start site region 153145
Tssr153146 18 43354781 to 43354803 22 - TSS region transcription start site region 153146
C330024E10Rik 18 43359985 to 43360847 862 unclassified gene RIKEN cDNA C330024E10 gene
Tssr153147 18 43360995 to 43360999 4 - TSS region transcription start site region 153147
Tssr153148 18 43361063 to 43361072 9 - TSS region transcription start site region 153148
Tssr153149 18 43373193 to 43373204 11 - TSS region transcription start site region 153149
Tssr153150 18 43373217 to 43373245 28 - TSS region transcription start site region 153150
Tssr153151 18 43373248 to 43373267 19 - TSS region transcription start site region 153151
Tssr153152 18 43373292 to 43373293 1 - TSS region transcription start site region 153152
D18Mit202 18 43391935 to 43392045 110 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 202
Cpgi10004 18 43392496 to 43393779 1283 CpG island CpG island 10004
Tssr153153 18 43393051 to 43393137 86 - TSS region transcription start site region 153153
Tssr153154 18 43393138 to 43393150 12 - TSS region transcription start site region 153154
Tssr153155 18 43393151 to 43393170 19 - TSS region transcription start site region 153155
Tssr153156 18 43393186 to 43393218 32 - TSS region transcription start site region 153156
Tssr153157 18 43393261 to 43393275 14 - TSS region transcription start site region 153157
Tssr153158 18 43393278 to 43393298 20 - TSS region transcription start site region 153158
Tssr153159 18 43393346 to 43393381 35 - TSS region transcription start site region 153159