Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:42948550-43261273

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp2r2b 18 42645221 to 43059471 414250 - protein coding gene protein phosphatase 2, regulatory subunit B, beta
Tssr5300 18 42952479 to 42952480 1 + TSS region transcription start site region 5300
4930572J10Rik 18 43038550 to 43171273 132723 lncRNA gene RIKEN cDNA 4930572J10 gene
Gm41712 18 43059417 to 43067590 8173 + lncRNA gene predicted gene, 41712
Tssr153134 18 43059418 to 43059466 48 - TSS region transcription start site region 153134
Tssr153135 18 43059527 to 43059538 11 - TSS region transcription start site region 153135
Tssr5301 18 43059564 to 43059569 5 - TSS region transcription start site region 5301
Tssr153136 18 43059617 to 43059642 25 - TSS region transcription start site region 153136
Gm22264 18 43070300 to 43070406 106 - snRNA gene predicted gene, 22264
Gm46622 18 43154736 to 43161986 7250 - lncRNA gene predicted gene, 46622
Gm8181 18 43171159 to 43171827 668 + pseudogene predicted gene 8181
Cpgi10001 18 43176235 to 43176471 236 CpG island CpG island 10001
Cpgi10002 18 43207444 to 43207906 462 CpG island CpG island 10002
Tssr150886 18 43207525 to 43207538 13 + TSS region transcription start site region 150886
Tssr150887 18 43207551 to 43207563 12 + TSS region transcription start site region 150887
Tssr150888 18 43207622 to 43207678 56 + TSS region transcription start site region 150888
Tssr150889 18 43207679 to 43207700 21 + TSS region transcription start site region 150889
Stk32a 18 43207697 to 43317481 109784 + protein coding gene serine/threonine kinase 32A
Tssr150890 18 43207710 to 43207721 11 + TSS region transcription start site region 150890
Tssr150891 18 43207724 to 43207737 13 + TSS region transcription start site region 150891
Gm31647 18 43246613 to 43250551 3938 - lncRNA gene predicted gene, 31647