Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:42126680-42266698

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sh3rf2 18 42053667 to 42158960 105293 + protein coding gene SH3 domain containing ring finger 2
Tssr150868 18 42141902 to 42141919 17 + TSS region transcription start site region 150868
Tssr150869 18 42143027 to 42143039 12 + TSS region transcription start site region 150869
Tssr5298 18 42173317 to 42173323 6 + TSS region transcription start site region 5298
Cstdc7 18 42173370 to 42173663 293 + pseudogene cystatin domain containing 7
Plac8l1 18 42178675 to 42196709 18034 - protein coding gene PLAC8-like 1
Gm18086 18 42186175 to 42187772 1597 - pseudogene predicted gene, 18086
Tssr153111 18 42196680 to 42196698 18 - TSS region transcription start site region 153111
Tssr153112 18 42196699 to 42196739 40 - TSS region transcription start site region 153112
Tssr5299 18 42196743 to 42196747 4 - TSS region transcription start site region 5299
Gm5504 18 42200659 to 42201592 933 + pseudogene predicted gene 5504
Lars 18 42202350 to 42262122 59772 - protein coding gene leucyl-tRNA synthetase
Cpgi9990 18 42202441 to 42203007 566 CpG island CpG island 9990
Tssr153113 18 42216926 to 42216945 19 - TSS region transcription start site region 153113
Tssr153114 18 42229863 to 42229872 9 - TSS region transcription start site region 153114
Tssr153115 18 42249465 to 42249468 3 - TSS region transcription start site region 153115
Rps19-ps4 18 42252398 to 42252835 437 + pseudogene ribosomal protein S19, pseudogene 4
Tssr153116 18 42253761 to 42253768 7 - TSS region transcription start site region 153116
Cpgi9991 18 42261726 to 42262501 775 CpG island CpG island 9991
Tssr153117 18 42261978 to 42262013 35 - TSS region transcription start site region 153117
Tssr153118 18 42262053 to 42262140 87 - TSS region transcription start site region 153118
Tssr153119 18 42262142 to 42262153 11 - TSS region transcription start site region 153119