Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:42018027-42268039

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr5297 18 42052455 to 42052466 11 + TSS region transcription start site region 5297
Tssr150863 18 42052475 to 42052487 12 + TSS region transcription start site region 150863
D18Mit113 18 42052827 to 42052945 118 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 113
D18Mit114 18 42052827 to 42052968 141 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 114
Tssr150864 18 42053648 to 42053662 14 + TSS region transcription start site region 150864
Sh3rf2 18 42053667 to 42158960 105293 + protein coding gene SH3 domain containing ring finger 2
Tssr150865 18 42053675 to 42053689 14 + TSS region transcription start site region 150865
Tssr150866 18 42053692 to 42053724 32 + TSS region transcription start site region 150866
Tssr150867 18 42053727 to 42053738 11 + TSS region transcription start site region 150867
Tssr150868 18 42141902 to 42141919 17 + TSS region transcription start site region 150868
Tssr150869 18 42143027 to 42143039 12 + TSS region transcription start site region 150869
Tssr5298 18 42173317 to 42173323 6 + TSS region transcription start site region 5298
Cstdc7 18 42173370 to 42173663 293 + pseudogene cystatin domain containing 7
Plac8l1 18 42178675 to 42196709 18034 - protein coding gene PLAC8-like 1
Gm18086 18 42186175 to 42187772 1597 - pseudogene predicted gene, 18086
Tssr153111 18 42196680 to 42196698 18 - TSS region transcription start site region 153111
Tssr153112 18 42196699 to 42196739 40 - TSS region transcription start site region 153112
Tssr5299 18 42196743 to 42196747 4 - TSS region transcription start site region 5299
Gm5504 18 42200659 to 42201592 933 + pseudogene predicted gene 5504
Lars 18 42202350 to 42262122 59772 - protein coding gene leucyl-tRNA synthetase
Cpgi9990 18 42202441 to 42203007 566 CpG island CpG island 9990
Tssr153113 18 42216926 to 42216945 19 - TSS region transcription start site region 153113
Tssr153114 18 42229863 to 42229872 9 - TSS region transcription start site region 153114
Tssr153115 18 42249465 to 42249468 3 - TSS region transcription start site region 153115
Rps19-ps4 18 42252398 to 42252835 437 + pseudogene ribosomal protein S19, pseudogene 4
Tssr153116 18 42253761 to 42253768 7 - TSS region transcription start site region 153116
Cpgi9991 18 42261726 to 42262501 775 CpG island CpG island 9991
Tssr153117 18 42261978 to 42262013 35 - TSS region transcription start site region 153117
Tssr153118 18 42262053 to 42262140 87 - TSS region transcription start site region 153118
Tssr153119 18 42262142 to 42262153 11 - TSS region transcription start site region 153119