MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:35819730-35839756

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr152917	18	35822865 to 35822875	10	-	TSS region	transcription start site region 152917
Tssr150566	18	35828798 to 35828815	17	+	TSS region	transcription start site region 150566
Tssr150567	18	35828853 to 35828868	15	+	TSS region	transcription start site region 150567
Cpgi9844	18	35829160 to 35831196	2036		CpG island	CpG island 9844
Tssr150568	18	35829730 to 35829756	26	+	TSS region	transcription start site region 150568
Tssr150569	18	35829779 to 35829795	16	+	TSS region	transcription start site region 150569
Tssr150570	18	35829798 to 35829821	23	+	TSS region	transcription start site region 150570
Cxxc5	18	35829818 to 35861687	31869	+	protein coding gene	CXXC finger 5
Tssr150571	18	35829828 to 35829839	11	+	TSS region	transcription start site region 150571
Tssr150572	18	35829840 to 35829851	11	+	TSS region	transcription start site region 150572
Tssr150573	18	35830091 to 35830111	20	+	TSS region	transcription start site region 150573
Tssr152918	18	35830125 to 35830137	12	-	TSS region	transcription start site region 152918
Tssr150574	18	35830179 to 35830208	29	+	TSS region	transcription start site region 150574
Tssr150575	18	35830300 to 35830363	63	+	TSS region	transcription start site region 150575
Gm29417	18	35830389 to 35831093	704	-	antisense lncRNA gene	predicted gene 29417
Tssr150576	18	35830971 to 35830973	2	+	TSS region	transcription start site region 150576
Cpgi9845	18	35831298 to 35831495	197		CpG island	CpG island 9845
Cpgi9846	18	35831633 to 35832306	673		CpG island	CpG island 9846