MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:35581001-35621005

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Matr3	18	35562158 to 35592045	29887	+	protein coding gene	matrin 3
Tssr150536	18	35582789 to 35582811	22	+	TSS region	transcription start site region 150536
Tssr150537	18	35584738 to 35584767	29	+	TSS region	transcription start site region 150537
Cpgi9837	18	35598377 to 35599301	924		CpG island	CpG island 9837
Tssr150538	18	35598607 to 35598653	46	+	TSS region	transcription start site region 150538
Paip2	18	35598641 to 35617185	18544	+	protein coding gene	polyadenylate-binding protein-interacting protein 2
Tssr150539	18	35598654 to 35598672	18	+	TSS region	transcription start site region 150539
Tssr150540	18	35598687 to 35598698	11	+	TSS region	transcription start site region 150540
Tssr150541	18	35599198 to 35599215	17	+	TSS region	transcription start site region 150541
Tssr150542	18	35599219 to 35599269	50	+	TSS region	transcription start site region 150542
Tssr150543	18	35601001 to 35601005	4	+	TSS region	transcription start site region 150543
Tssr150544	18	35607931 to 35607935	4	+	TSS region	transcription start site region 150544
Tssr150545	18	35609054 to 35609060	6	+	TSS region	transcription start site region 150545
D18Ertd665e	18	35613576 to 35613787	211		DNA segment	DNA segment, Chr 18, ERATO Doi 665, expressed
Slc23a1	18	35614604 to 35627227	12623	-	protein coding gene	solute carrier family 23 (nucleobase transporters), member 1
Tssr152872	18	35615397 to 35615407	10	-	TSS region	transcription start site region 152872
Tssr152873	18	35619636 to 35619651	15	-	TSS region	transcription start site region 152873