Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:31953084-32313510

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lims2 18 31922290 to 31958619 36329 + protein coding gene LIM and senescent cell antigen like domains 2
Tssr150379 18 31954830 to 31954872 42 + TSS region transcription start site region 150379
Tssr150380 18 31955107 to 31955129 22 + TSS region transcription start site region 150380
Tssr150381 18 31958014 to 31958039 25 + TSS region transcription start site region 150381
Myo7b 18 31959234 to 32036931 77697 - protein coding gene myosin VIIB
Tssr152724 18 31998130 to 31998157 27 - TSS region transcription start site region 152724
Gm16344 18 32021740 to 32026610 4870 + antisense lncRNA gene predicted gene 16344
Gm16345 18 32031089 to 32031246 157 + pseudogene predicted gene 16345
Tssr152725 18 32035176 to 32035180 4 - TSS region transcription start site region 152725
Tssr152726 18 32036941 to 32037019 78 - TSS region transcription start site region 152726
Gm35010 18 32056113 to 32057494 1381 + pseudogene predicted gene, 35010
Cpgi9796 18 32067522 to 32068316 794 CpG island CpG island 9796
Tssr150382 18 32067729 to 32067811 82 + TSS region transcription start site region 150382
Iws1 18 32067741 to 32104328 36587 + protein coding gene IWS1, SUPT6 interacting protein
Tssr150383 18 32067973 to 32068013 40 + TSS region transcription start site region 150383
Tssr152727 18 32068158 to 32068195 37 - TSS region transcription start site region 152727
Tssr150384 18 32068883 to 32068887 4 + TSS region transcription start site region 150384
Gm49966 18 32112041 to 32112307 266 - pseudogene predicted gene, 49966
4933435E02Rik 18 32112459 to 32120412 7953 unclassified gene RIKEN cDNA 4933435E02 gene
Proc 18 32123126 to 32139570 16444 - protein coding gene protein C
Cpgi9797 18 32133084 to 32133510 426 CpG island CpG island 9797
Tssr152728 18 32134659 to 32134690 31 - TSS region transcription start site region 152728
Tssr152729 18 32135952 to 32135954 2 - TSS region transcription start site region 152729
Tssr152730 18 32136511 to 32136514 3 - TSS region transcription start site region 152730
Tssr152731 18 32138020 to 32138027 7 - TSS region transcription start site region 152731
Tssr152732 18 32138162 to 32138169 7 - TSS region transcription start site region 152732
Tssr152733 18 32138175 to 32138199 24 - TSS region transcription start site region 152733
Cpgi9798 18 32139500 to 32139888 388 CpG island CpG island 9798
Gm5969 18 32140729 to 32141830 1101 + pseudogene predicted gene 5969
Cpgi9799 18 32147545 to 32147785 240 CpG island CpG island 9799
Tssr5268 18 32147743 to 32147756 13 + TSS region transcription start site region 5268
Gm26717 18 32152427 to 32158291 5864 + lincRNA gene predicted gene, 26717
Gm34806 18 32154406 to 32162759 8353 - lncRNA gene predicted gene, 34806
Cpgi9800 18 32162560 to 32163859 1299 CpG island CpG island 9800
Tssr150385 18 32162972 to 32162982 10 + TSS region transcription start site region 150385
Tssr5269 18 32162991 to 32162992 1 + TSS region transcription start site region 5269
Tssr150386 18 32163015 to 32163020 5 + TSS region transcription start site region 150386
Tssr150387 18 32163042 to 32163053 11 + TSS region transcription start site region 150387
Tssr150388 18 32163062 to 32163069 7 + TSS region transcription start site region 150388
Tssr150389 18 32163073 to 32163115 42 + TSS region transcription start site region 150389
Map3k2 18 32163089 to 32236751 73662 + protein coding gene mitogen-activated protein kinase kinase kinase 2
Cpgi9801 18 32239991 to 32240746 755 CpG island CpG island 9801
Tssr152734 18 32240227 to 32240274 47 - TSS region transcription start site region 152734
Ercc3 18 32240304 to 32270151 29847 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 3
Tssr150390 18 32240309 to 32240342 33 + TSS region transcription start site region 150390
Gm22325 18 32293350 to 32293657 307 + unclassified non-coding RNA gene predicted gene, 22325
D18Mit88 18 32312317 to 32312456 139 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 88