MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:7932522-8151241

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tagap	17	7926000 to 7934897	8897	+	protein coding gene	T cell activation Rho GTPase activating protein
Tssr142510	17	7945585 to 7945636	51	+	TSS region	transcription start site region 142510
Rsph3a	17	7945614 to 7979556	33942	+	protein coding gene	radial spoke 3A homolog (Chlamydomonas)
Tssr146353	17	7945844 to 7945891	47	-	TSS region	transcription start site region 146353
Cpgi8582	17	7945907 to 7946205	298		CpG island	CpG island 8582
Tssr142511	17	7945981 to 7945990	9	+	TSS region	transcription start site region 142511
Tssr142512	17	7945992 to 7946041	49	+	TSS region	transcription start site region 142512
Gm1604a	17	7982522 to 8101241	118719	-	protein coding gene	predicted gene 1604A
Tssr146354	17	7987237 to 7987239	2	-	TSS region	transcription start site region 146354
Gm49673	17	8082695 to 8147788	65093	-	protein coding gene	predicted gene, 49673
Gm22416	17	8084075 to 8084162	87	+	snoRNA gene	predicted gene, 22416
D17Mit98b	17	8104167 to 8104426	259		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 98b
Gm41523	17	8115831 to 8123701	7870	-	lncRNA gene	predicted gene, 41523
Rnaset2a	17	8128592 to 8147827	19235	-	protein coding gene	ribonuclease T2A
D17Mit195b	17	8147170 to 8147262	92		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 195b
Cpgi8583	17	8147561 to 8148236	675		CpG island	CpG island 8583
Tssr146355	17	8147704 to 8147734	30	-	TSS region	transcription start site region 146355
Flal1	17	11000000 to 8000000	-3000000		QTL	fatty liver accumulation QTL 1, females only