Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:75536640-78337041

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D17Mit1007 17 75536599 to 75536725 126 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1007
Fam98a 17 75537086 to 75551946 14860 - protein coding gene family with sequence similarity 98, member A
Cpgi9503 17 75551360 to 75552213 853 CpG island CpG island 9503
Tssr149393 17 75551790 to 75551834 44 - TSS region transcription start site region 149393
Tssr149394 17 75551838 to 75551901 63 - TSS region transcription start site region 149394
Gm9360 17 75661240 to 75662226 986 + pseudogene predicted gene 9360
Gm46584 17 75696591 to 75706391 9800 + lncRNA gene predicted gene, 46584
Tssr149395 17 75701117 to 75701118 1 - TSS region transcription start site region 149395
Gm50099 17 75833837 to 75834256 419 + pseudogene predicted gene, 50099
Gm4710 17 75861023 to 75889039 28016 + lncRNA gene predicted gene 4710
D17Mit94 17 75878949 to 75879095 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 94
Gm24126 17 76074546 to 76074651 105 + snRNA gene predicted gene, 24126
Gm26124 17 76111197 to 76111304 107 - unclassified non-coding RNA gene predicted gene, 26124
Gm16391 17 76284415 to 76284861 446 - pseudogene predicted pseudogene 16391
Gm50028 17 76327541 to 76339195 11654 - lincRNA gene predicted gene, 50028
D17Mit127 17 76577956 to 76578072 116 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 127
Gm18366 17 76821001 to 76821502 501 - pseudogene predicted gene, 18366
Tssr149396 17 76886868 to 76886873 5 - TSS region transcription start site region 149396
Gm6496 17 76936640 to 76937041 401 + pseudogene predicted gene 6496
Rpsa-ps8 17 77362353 to 77363210 857 - pseudogene ribosomal protein SA, pseudogene 8
Gm17538 17 77674376 to 77674700 324 - pseudogene predicted gene, 17538
Gm4711 17 77686625 to 77687349 724 - pseudogene predicted gene 4711
Gm32076 17 77989540 to 78027578 38038 + lncRNA gene predicted gene, 32076
Gm50029 17 78109008 to 78109577 569 + pseudogene predicted gene, 50029
Gm50030 17 78157990 to 78158249 259 + pseudogene predicted gene, 50030
Gm5229 17 78177590 to 78177947 357 - pseudogene predicted gene 5229
Gm50031 17 78184918 to 78185073 155 + pseudogene predicted gene, 50031
Gm32282 17 78199256 to 78200025 769 - lncRNA gene predicted gene, 32282
Cpgi9504 17 78199601 to 78201864 2263 CpG island CpG island 9504
Tssr145888 17 78200190 to 78200228 38 + TSS region transcription start site region 145888
Tssr145889 17 78200240 to 78200258 18 + TSS region transcription start site region 145889
Crim1 17 78200248 to 78376592 176344 + protein coding gene cysteine rich transmembrane BMP regulator 1 (chordin like)
Tssr145890 17 78200339 to 78200383 44 + TSS region transcription start site region 145890
Tssr145891 17 78264828 to 78264833 5 + TSS region transcription start site region 145891
Tssr145892 17 78272440 to 78272450 10 + TSS region transcription start site region 145892
Gm41620 17 78281373 to 78288362 6989 + lncRNA gene predicted gene, 41620
Gm25069 17 78302661 to 78302746 85 + miRNA gene predicted gene, 25069
Tssr145893 17 78308473 to 78308480 7 + TSS region transcription start site region 145893