Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:57080916-57130948

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tubb4a 17 57080066 to 57087782 7716 - protein coding gene tubulin, beta 4A class IVA
Tssr148891 17 57080936 to 57080950 14 - TSS region transcription start site region 148891
Tssr148892 17 57080956 to 57080969 13 - TSS region transcription start site region 148892
Cpgi9393 17 57081089 to 57081840 751 CpG island CpG island 9393
Tssr148893 17 57081170 to 57081182 12 - TSS region transcription start site region 148893
Tssr148894 17 57081242 to 57081254 12 - TSS region transcription start site region 148894
Tssr148895 17 57081646 to 57081658 12 - TSS region transcription start site region 148895
Tssr148896 17 57081708 to 57081725 17 - TSS region transcription start site region 148896
Cpgi9394 17 57087153 to 57087787 634 CpG island CpG island 9394
Tssr148897 17 57087557 to 57087612 55 - TSS region transcription start site region 148897
Tssr148898 17 57087614 to 57087636 22 - TSS region transcription start site region 148898
Tssr148899 17 57087637 to 57087657 20 - TSS region transcription start site region 148899
Tssr5183 17 57087659 to 57087669 10 - TSS region transcription start site region 5183
Tssr148900 17 57087729 to 57087734 5 - TSS region transcription start site region 148900
Gm11110 17 57092023 to 57105942 13919 - lincRNA gene predicted gene 11110
Cpgi9395 17 57096587 to 57096766 179 CpG island CpG island 9395
Gm46589 17 57096733 to 57098544 1811 + lncRNA gene predicted gene, 46589
Cpgi9396 17 57105192 to 57106114 922 CpG island CpG island 9396
Tnfsf9 17 57105325 to 57107757 2432 + protein coding gene tumor necrosis factor (ligand) superfamily, member 9
Tssr145375 17 57105401 to 57105421 20 + TSS region transcription start site region 145375
Tssr148901 17 57105916 to 57105948 32 - TSS region transcription start site region 148901
Tssr145376 17 57106632 to 57106643 11 + TSS region transcription start site region 145376
D17Mit252 17 57107800 to 57107924 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 252
Gm49892 17 57115118 to 57115447 329 + pseudogene predicted gene, 49892