Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56160191-56290204

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9347 17 56162137 to 56162664 527 CpG island CpG island 9347
Tssr145287 17 56162486 to 56162549 63 + TSS region transcription start site region 145287
Tnfaip8l1 17 56162491 to 56173955 11464 + protein coding gene tumor necrosis factor, alpha-induced protein 8-like 1
Tssr145288 17 56162552 to 56162567 15 + TSS region transcription start site region 145288
Gm44397 17 56172013 to 56172125 112 - miRNA gene predicted gene, 44397
Mydgf 17 56176541 to 56183920 7379 - protein coding gene myeloid derived growth factor
Cpgi9348 17 56183358 to 56184208 850 CpG island CpG island 9348
Tssr148771 17 56183887 to 56183938 51 - TSS region transcription start site region 148771
Dpp9 17 56186807 to 56218905 32098 - protein coding gene dipeptidylpeptidase 9
Cpgi9349 17 56217969 to 56219486 1517 CpG island CpG island 9349
Tssr148772 17 56218562 to 56218637 75 - TSS region transcription start site region 148772
Tssr148773 17 56218816 to 56218874 58 - TSS region transcription start site region 148773
Tssr148774 17 56218881 to 56218922 41 - TSS region transcription start site region 148774
Tssr145289 17 56225191 to 56225204 13 + TSS region transcription start site region 145289
Gm49879 17 56238909 to 56239361 452 + pseudogene predicted gene, 49879
Cpgi9350 17 56241714 to 56242284 570 CpG island CpG island 9350
A230051N06Rik 17 56241717 to 56242805 1088 + lincRNA gene RIKEN cDNA A230051N06 gene
Tssr145290 17 56241740 to 56241751 11 + TSS region transcription start site region 145290
Tssr145291 17 56241752 to 56241786 34 + TSS region transcription start site region 145291
Mir7b 17 56242988 to 56243098 110 + miRNA gene microRNA 7b
Cpgi9351 17 56255847 to 56256299 452 CpG island CpG island 9351
Cpgi9352 17 56256541 to 56257954 1413 CpG island CpG island 9352
Tssr145292 17 56256802 to 56256836 34 + TSS region transcription start site region 145292
Fem1a 17 56256810 to 56263610 6800 + protein coding gene feminization 1 homolog a (C. elegans)
Tssr145293 17 56265827 to 56265831 4 + TSS region transcription start site region 145293
Ticam1 17 56269462 to 56276767 7305 - protein coding gene toll-like receptor adaptor molecule 1
Tssr148775 17 56271249 to 56271263 14 - TSS region transcription start site region 148775
Tssr148776 17 56276703 to 56276714 11 - TSS region transcription start site region 148776
Tssr148777 17 56276718 to 56276749 31 - TSS region transcription start site region 148777
Tssr148778 17 56276750 to 56276773 23 - TSS region transcription start site region 148778
Plin3 17 56278962 to 56290511 11549 - protein coding gene perilipin 3
Tssr148779 17 56287863 to 56287866 3 - TSS region transcription start site region 148779
Tssr148780 17 56287880 to 56287909 29 - TSS region transcription start site region 148780
Tssr148781 17 56287925 to 56287954 29 - TSS region transcription start site region 148781
Tssr148782 17 56287957 to 56288001 44 - TSS region transcription start site region 148782
Tssr145294 17 56289576 to 56289579 3 + TSS region transcription start site region 145294
Tssr148783 17 56290065 to 56290084 19 - TSS region transcription start site region 148783