Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56080194-56160215

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9338 17 56079041 to 56080405 1364 CpG island CpG island 9338
Hdgfl2 17 56079634 to 56100607 20973 + protein coding gene HDGF like 2
Tssr145282 17 56081434 to 56081455 21 + TSS region transcription start site region 145282
Tssr145283 17 56081457 to 56081489 32 + TSS region transcription start site region 145283
Tssr145284 17 56082118 to 56082139 21 + TSS region transcription start site region 145284
n-TEctc4 17 56092001 to 56092072 71 - tRNA gene nuclear encoded tRNA glutamic acid 4 (anticodon CTC)
Tssr145285 17 56092505 to 56092507 2 + TSS region transcription start site region 145285
Plin4 17 56100591 to 56109803 9212 - protein coding gene perilipin 4
Tssr5173 17 56103245 to 56103263 18 - TSS region transcription start site region 5173
Tssr148740 17 56108657 to 56108678 21 - TSS region transcription start site region 148740
Tssr148741 17 56109717 to 56109737 20 - TSS region transcription start site region 148741
Tssr148742 17 56109744 to 56109755 11 - TSS region transcription start site region 148742
Tssr148743 17 56109756 to 56109767 11 - TSS region transcription start site region 148743
Tssr148744 17 56109775 to 56109794 19 - TSS region transcription start site region 148744
Tssr148745 17 56109800 to 56109806 6 - TSS region transcription start site region 148745
Tssr148746 17 56109815 to 56109824 9 - TSS region transcription start site region 148746
Plin5 17 56111601 to 56117596 5995 - protein coding gene perilipin 5
Cpgi9339 17 56117182 to 56117727 545 CpG island CpG island 9339
Tssr148747 17 56117265 to 56117283 18 - TSS region transcription start site region 148747
Tssr148748 17 56117537 to 56117551 14 - TSS region transcription start site region 148748
Tssr148749 17 56117577 to 56117588 11 - TSS region transcription start site region 148749
Lrg1 17 56119678 to 56121946 2268 - protein coding gene leucine-rich alpha-2-glycoprotein 1
Cpgi9340 17 56119796 to 56120927 1131 CpG island CpG island 9340
Tssr148750 17 56120116 to 56120131 15 - TSS region transcription start site region 148750
Tssr5174 17 56120194 to 56120215 21 + TSS region transcription start site region 5174
Tssr148751 17 56120293 to 56120314 21 - TSS region transcription start site region 148751
Tssr148752 17 56120348 to 56120366 18 - TSS region transcription start site region 148752
Tssr148753 17 56120613 to 56120620 7 - TSS region transcription start site region 148753
Tssr148754 17 56120671 to 56120681 10 - TSS region transcription start site region 148754
Tssr148755 17 56120793 to 56120818 25 - TSS region transcription start site region 148755
Tssr148756 17 56120832 to 56120848 16 - TSS region transcription start site region 148756
Tssr148757 17 56121010 to 56121028 18 - TSS region transcription start site region 148757
Tssr148758 17 56121030 to 56121063 33 - TSS region transcription start site region 148758
Tssr148759 17 56121897 to 56121920 23 - TSS region transcription start site region 148759
Tssr5175 17 56121924 to 56121942 18 - TSS region transcription start site region 5175
Tssr148760 17 56121951 to 56121958 7 - TSS region transcription start site region 148760
Tssr148761 17 56121965 to 56121986 21 - TSS region transcription start site region 148761
Tssr148762 17 56121994 to 56122001 7 - TSS region transcription start site region 148762
Sema6b 17 56123085 to 56140343 17258 - protein coding gene sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
Cpgi9341 17 56123431 to 56125079 1648 CpG island CpG island 9341
Cpgi9342 17 56128276 to 56128499 223 CpG island CpG island 9342
Tssr148763 17 56133759 to 56133780 21 - TSS region transcription start site region 148763
Tssr148764 17 56133785 to 56133797 12 - TSS region transcription start site region 148764
Tssr148765 17 56133817 to 56133854 37 - TSS region transcription start site region 148765
Tssr148766 17 56133887 to 56133911 24 - TSS region transcription start site region 148766
Tssr148767 17 56133932 to 56133941 9 - TSS region transcription start site region 148767
Tssr145286 17 56134268 to 56134282 14 + TSS region transcription start site region 145286
Cpgi9343 17 56134399 to 56134985 586 CpG island CpG island 9343
Cpgi9344 17 56139267 to 56141162 1895 CpG island CpG island 9344
Tssr148768 17 56140314 to 56140327 13 - TSS region transcription start site region 148768
Tssr148769 17 56140333 to 56140384 51 - TSS region transcription start site region 148769
Tssr148770 17 56140389 to 56140408 19 - TSS region transcription start site region 148770
Cpgi9345 17 56141692 to 56142584 892 CpG island CpG island 9345
Cpgi9346 17 56148748 to 56149091 343 CpG island CpG island 9346