Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56059041-56100405

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chaf1a 17 56040416 to 56068026 27610 + protein coding gene chromatin assembly factor 1, subunit A (p150)
Ubxn6 17 56067045 to 56075028 7983 - protein coding gene UBX domain protein 6
Cpgi9337 17 56074484 to 56075383 899 CpG island CpG island 9337
Tssr148737 17 56074542 to 56074571 29 - TSS region transcription start site region 148737
Tssr148738 17 56074598 to 56074610 12 - TSS region transcription start site region 148738
Tssr145278 17 56074724 to 56074746 22 + TSS region transcription start site region 145278
Tssr148739 17 56074932 to 56075036 104 - TSS region transcription start site region 148739
Cpgi9338 17 56079041 to 56080405 1364 CpG island CpG island 9338
Tssr5172 17 56079609 to 56079610 1 + TSS region transcription start site region 5172
Tssr145279 17 56079628 to 56079643 15 + TSS region transcription start site region 145279
Hdgfl2 17 56079634 to 56100607 20973 + protein coding gene HDGF like 2
Tssr145280 17 56079652 to 56079667 15 + TSS region transcription start site region 145280
Tssr145281 17 56079672 to 56079704 32 + TSS region transcription start site region 145281
Tssr145282 17 56081434 to 56081455 21 + TSS region transcription start site region 145282
Tssr145283 17 56081457 to 56081489 32 + TSS region transcription start site region 145283
Tssr145284 17 56082118 to 56082139 21 + TSS region transcription start site region 145284
n-TEctc4 17 56092001 to 56092072 71 - tRNA gene nuclear encoded tRNA glutamic acid 4 (anticodon CTC)
Tssr145285 17 56092505 to 56092507 2 + TSS region transcription start site region 145285