Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56041457-56121489

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chaf1a 17 56040416 to 56068026 27610 + protein coding gene chromatin assembly factor 1, subunit A (p150)
Ubxn6 17 56067045 to 56075028 7983 - protein coding gene UBX domain protein 6
Cpgi9337 17 56074484 to 56075383 899 CpG island CpG island 9337
Tssr148737 17 56074542 to 56074571 29 - TSS region transcription start site region 148737
Tssr148738 17 56074598 to 56074610 12 - TSS region transcription start site region 148738
Tssr145278 17 56074724 to 56074746 22 + TSS region transcription start site region 145278
Tssr148739 17 56074932 to 56075036 104 - TSS region transcription start site region 148739
Cpgi9338 17 56079041 to 56080405 1364 CpG island CpG island 9338
Tssr5172 17 56079609 to 56079610 1 + TSS region transcription start site region 5172
Tssr145279 17 56079628 to 56079643 15 + TSS region transcription start site region 145279
Hdgfl2 17 56079634 to 56100607 20973 + protein coding gene HDGF like 2
Tssr145280 17 56079652 to 56079667 15 + TSS region transcription start site region 145280
Tssr145281 17 56079672 to 56079704 32 + TSS region transcription start site region 145281
Tssr145282 17 56081434 to 56081455 21 + TSS region transcription start site region 145282
Tssr145283 17 56081457 to 56081489 32 + TSS region transcription start site region 145283
Tssr145284 17 56082118 to 56082139 21 + TSS region transcription start site region 145284
n-TEctc4 17 56092001 to 56092072 71 - tRNA gene nuclear encoded tRNA glutamic acid 4 (anticodon CTC)
Tssr145285 17 56092505 to 56092507 2 + TSS region transcription start site region 145285
Plin4 17 56100591 to 56109803 9212 - protein coding gene perilipin 4
Tssr5173 17 56103245 to 56103263 18 - TSS region transcription start site region 5173
Tssr148740 17 56108657 to 56108678 21 - TSS region transcription start site region 148740
Tssr148741 17 56109717 to 56109737 20 - TSS region transcription start site region 148741
Tssr148742 17 56109744 to 56109755 11 - TSS region transcription start site region 148742
Tssr148743 17 56109756 to 56109767 11 - TSS region transcription start site region 148743
Tssr148744 17 56109775 to 56109794 19 - TSS region transcription start site region 148744
Tssr148745 17 56109800 to 56109806 6 - TSS region transcription start site region 148745
Tssr148746 17 56109815 to 56109824 9 - TSS region transcription start site region 148746
Plin5 17 56111601 to 56117596 5995 - protein coding gene perilipin 5
Cpgi9339 17 56117182 to 56117727 545 CpG island CpG island 9339
Tssr148747 17 56117265 to 56117283 18 - TSS region transcription start site region 148747
Tssr148748 17 56117537 to 56117551 14 - TSS region transcription start site region 148748
Tssr148749 17 56117577 to 56117588 11 - TSS region transcription start site region 148749
Lrg1 17 56119678 to 56121946 2268 - protein coding gene leucine-rich alpha-2-glycoprotein 1
Cpgi9340 17 56119796 to 56120927 1131 CpG island CpG island 9340
Tssr148750 17 56120116 to 56120131 15 - TSS region transcription start site region 148750
Tssr5174 17 56120194 to 56120215 21 + TSS region transcription start site region 5174
Tssr148751 17 56120293 to 56120314 21 - TSS region transcription start site region 148751
Tssr148752 17 56120348 to 56120366 18 - TSS region transcription start site region 148752
Tssr148753 17 56120613 to 56120620 7 - TSS region transcription start site region 148753
Tssr148754 17 56120671 to 56120681 10 - TSS region transcription start site region 148754
Tssr148755 17 56120793 to 56120818 25 - TSS region transcription start site region 148755
Tssr148756 17 56120832 to 56120848 16 - TSS region transcription start site region 148756
Tssr148757 17 56121010 to 56121028 18 - TSS region transcription start site region 148757
Tssr148758 17 56121030 to 56121063 33 - TSS region transcription start site region 148758