MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:55954187-55973285

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ebi3	17	55952640 to 55957022	4382	+	protein coding gene	Epstein-Barr virus induced gene 3
Tssr145257	17	55954318 to 55954338	20	+	TSS region	transcription start site region 145257
Tssr145258	17	55954340 to 55954371	31	+	TSS region	transcription start site region 145258
Gm16712	17	55954771 to 55959381	4610	-	antisense lncRNA gene	predicted gene, 16712
Cpgi9328	17	55955980 to 55956471	491		CpG island	CpG island 9328
Cpgi9329	17	55958973 to 55959464	491		CpG island	CpG island 9329
Tssr145259	17	55959125 to 55959140	15	+	TSS region	transcription start site region 145259
Tssr145260	17	55959146 to 55959182	36	+	TSS region	transcription start site region 145260
Yju2	17	55959187 to 55968285	9098	+	protein coding gene	YJU2 splicing factor
Tssr145261	17	55959765 to 55959784	19	+	TSS region	transcription start site region 145261
Tssr145262	17	55961597 to 55961610	13	+	TSS region	transcription start site region 145262
Cpgi9330	17	55969932 to 55970888	956		CpG island	CpG island 9330
Tssr145263	17	55970451 to 55970485	34	+	TSS region	transcription start site region 145263
Shd	17	55970467 to 55976625	6158	+	protein coding gene	src homology 2 domain-containing transforming protein D
Tssr145264	17	55970496 to 55970577	81	+	TSS region	transcription start site region 145264
Tssr145265	17	55970589 to 55970603	14	+	TSS region	transcription start site region 145265
Tssr145266	17	55970646 to 55970660	14	+	TSS region	transcription start site region 145266
Cpgi9331	17	55971195 to 55971441	246		CpG island	CpG island 9331