Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:54224279-55494287

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sst5 17 24857609 to 55405969 30548360 QTL susceptibility to tuberculosis 5
Slc5a7 17 54273590 to 54299034 25444 - protein coding gene solute carrier family 5 (choline transporter), member 7
Tssr148723 17 54297185 to 54297195 10 - TSS region transcription start site region 148723
Cpgi9321 17 54298305 to 54298933 628 CpG island CpG island 9321
Tssr5170 17 54298451 to 54298460 9 - TSS region transcription start site region 5170
Tssr148724 17 54298718 to 54298732 14 - TSS region transcription start site region 148724
Gm9224 17 54346540 to 54347593 1053 - pseudogene predicted gene 9224
1700025K24Rik 17 54352583 to 54370074 17491 - lincRNA gene RIKEN cDNA 1700025K24 gene
Gm49919 17 54354718 to 54355159 441 - pseudogene predicted gene, 49919
Trp53-ps 17 54419680 to 54420841 1161 + pseudogene transformation related protein 53, pseudogene
Tssr145235 17 54420718 to 54420755 37 + TSS region transcription start site region 145235
Gm4946 17 54507415 to 54508222 807 + pseudogene predicted gene 4946
D17Mit1009 17 54557272 to 54557398 126 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1009
Gm26291 17 54651936 to 54652072 136 + snoRNA gene predicted gene, 26291
Gm32055 17 54852562 to 54860472 7910 + lincRNA gene predicted gene, 32055
Tssr145236 17 54859279 to 54859287 8 + TSS region transcription start site region 145236
Gm49920 17 55063412 to 55063999 587 + pseudogene predicted gene, 49920
Gm46577 17 55143175 to 55143546 371 + pseudogene predicted gene, 46577
D17Mit251 17 55168289 to 55168513 224 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 251
Gm4471 17 55247730 to 55248636 906 + pseudogene predicted gene 4471
Gm17377 17 55321612 to 55321817 205 + pseudogene predicted gene, 17377
Gm49921 17 55388244 to 55388707 463 - pseudogene predicted gene, 49921
D17Mit87 17 55405886 to 55405969 83 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 87
Pcyts5 17 55405886 to 55405969 83 QTL plasmacytoma susceptibility 5
Cpgi9322 17 55445227 to 55446455 1228 CpG island CpG island 9322
Tssr145237 17 55445375 to 55445388 13 + TSS region transcription start site region 145237
St6gal2 17 55445382 to 55514581 69199 + protein coding gene beta galactoside alpha 2,6 sialyltransferase 2
Tssr145238 17 55445484 to 55445499 15 + TSS region transcription start site region 145238
Tssr145239 17 55445671 to 55445701 30 + TSS region transcription start site region 145239
Tssr145240 17 55445704 to 55445730 26 + TSS region transcription start site region 145240
Tssr145241 17 55445746 to 55445755 9 + TSS region transcription start site region 145241
Tssr145242 17 55446238 to 55446257 19 + TSS region transcription start site region 145242
Cpgi9323 17 55482500 to 55482883 383 CpG island CpG island 9323