MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:50698124-51214352

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi9308	17	50698508 to 50698704	196		CpG island	CpG island 9308
Tssr145159	17	50698542 to 50698553	11	+	TSS region	transcription start site region 145159
Gm7334	17	50698688 to 50699443	755	+	pseudogene	predicted gene 7334
Tbc1d5	17	50733124 to 51179352	446228	-	protein coding gene	TBC1 domain family, member 5
Gm41598	17	50791436 to 50793590	2154	+	lncRNA gene	predicted gene, 41598
Gm31083	17	50879728 to 50899481	19753	+	lncRNA gene	predicted gene, 31083
Tssr148601	17	50879814 to 50879853	39	-	TSS region	transcription start site region 148601
Tssr5159	17	50891429 to 50891431	2	+	TSS region	transcription start site region 5159
Gm25177	17	50916925 to 50917041	116	-	snRNA gene	predicted gene, 25177
Tssr148602	17	50993677 to 50993688	11	-	TSS region	transcription start site region 148602
Tssr148603	17	51084260 to 51084264	4	-	TSS region	transcription start site region 148603
D17Mit9	17	51168551 to 51168656	105		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 9
Tssr148604	17	51171631 to 51171647	16	-	TSS region	transcription start site region 148604
Tssr148605	17	51175514 to 51175517	3	-	TSS region	transcription start site region 148605
Cpgi9309	17	51178509 to 51179787	1278		CpG island	CpG island 9309
Tssr145160	17	51178699 to 51178752	53	+	TSS region	transcription start site region 145160
Tssr148606	17	51179249 to 51179343	94	-	TSS region	transcription start site region 148606
D17Mit179	17	51195070 to 51195249	179		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 179