Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:50623124-51289352

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plcl2 17 50509403 to 50688484 179081 + protein coding gene phospholipase C-like 2
Tssr145158 17 50643093 to 50643105 12 + TSS region transcription start site region 145158
Tssr148600 17 50668973 to 50668976 3 - TSS region transcription start site region 148600
Cpgi9307 17 50677451 to 50677625 174 CpG island CpG island 9307
Cpgi9308 17 50698508 to 50698704 196 CpG island CpG island 9308
Tssr145159 17 50698542 to 50698553 11 + TSS region transcription start site region 145159
Gm7334 17 50698688 to 50699443 755 + pseudogene predicted gene 7334
Tbc1d5 17 50733124 to 51179352 446228 - protein coding gene TBC1 domain family, member 5
Gm41598 17 50791436 to 50793590 2154 + lncRNA gene predicted gene, 41598
Gm31083 17 50879728 to 50899481 19753 + lncRNA gene predicted gene, 31083
Tssr148601 17 50879814 to 50879853 39 - TSS region transcription start site region 148601
Tssr5159 17 50891429 to 50891431 2 + TSS region transcription start site region 5159
Gm25177 17 50916925 to 50917041 116 - snRNA gene predicted gene, 25177
Tssr148602 17 50993677 to 50993688 11 - TSS region transcription start site region 148602
Tssr148603 17 51084260 to 51084264 4 - TSS region transcription start site region 148603
D17Mit9 17 51168551 to 51168656 105 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 9
Tssr148604 17 51171631 to 51171647 16 - TSS region transcription start site region 148604
Tssr148605 17 51175514 to 51175517 3 - TSS region transcription start site region 148605
Cpgi9309 17 51178509 to 51179787 1278 CpG island CpG island 9309
Tssr145160 17 51178699 to 51178752 53 + TSS region transcription start site region 145160
Tssr148606 17 51179249 to 51179343 94 - TSS region transcription start site region 148606
D17Mit179 17 51195070 to 51195249 179 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 179
Gm49908 17 51236771 to 51237062 291 - pseudogene predicted gene, 49908