Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:47691614-47732530

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mrdq1 17 30768929 to 47728778 16959849 QTL modifier of retinal degeneration QTL 1
repro17 17 31842678 to 47722705 15880027 heritable phenotypic marker reproductive mutant 17, JAX Reproductive Mutagenesis Program
Gm21981 17 47686739 to 47694455 7716 - protein coding gene predicted gene 21981
Prickle4 17 47688517 to 47694736 6219 - protein coding gene prickle planar cell polarity protein 4
Frs3 17 47689030 to 47704286 15256 + protein coding gene fibroblast growth factor receptor substrate 3
Cpgi9269 17 47694488 to 47695712 1224 CpG island CpG island 9269
Tssr148456 17 47694733 to 47694755 22 - TSS region transcription start site region 148456
Tssr144999 17 47695171 to 47695204 33 + TSS region transcription start site region 144999
Frs3os 17 47699971 to 47701996 2025 - antisense lncRNA gene fibroblast growth factor receptor substrate 3, opposite strand
Tssr148457 17 47701973 to 47702008 35 - TSS region transcription start site region 148457
Tssr145000 17 47702895 to 47702908 13 + TSS region transcription start site region 145000
Tssr145001 17 47703169 to 47703182 13 + TSS region transcription start site region 145001
Tssr145002 17 47703206 to 47703247 41 + TSS region transcription start site region 145002
Gm46579 17 47711614 to 47712530 916 + lncRNA gene predicted gene, 46579
Tssr148458 17 47713340 to 47713351 11 - TSS region transcription start site region 148458
D17Mit66 17 47722575 to 47722705 130 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 66
Plgr1 17 47722575 to 47722705 130 QTL plague resistance locus 1
D17Dcr12 17 47722588 to 47722704 116 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 12
Tssr145003 17 47726834 to 47726848 14 + TSS region transcription start site region 145003
Pgc 17 47726842 to 47734478 7636 + protein coding gene progastricsin (pepsinogen C)
D17Mit201 17 47727211 to 47727335 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 201
Tssr145004 17 47728732 to 47728742 10 + TSS region transcription start site region 145004
Tssr5147 17 47728750 to 47728751 1 + TSS region transcription start site region 5147
Tssr145005 17 47728760 to 47728763 3 + TSS region transcription start site region 145005
Tssr145006 17 47728769 to 47728792 23 + TSS region transcription start site region 145006
Tssr145007 17 47728796 to 47728824 28 + TSS region transcription start site region 145007
Tssr148459 17 47728796 to 47728801 5 - TSS region transcription start site region 148459
Tssr148460 17 47728817 to 47728853 36 - TSS region transcription start site region 148460
Tssr145008 17 47728830 to 47728845 15 + TSS region transcription start site region 145008
Tssr145009 17 47728847 to 47728873 26 + TSS region transcription start site region 145009
Tssr148461 17 47728856 to 47728865 9 - TSS region transcription start site region 148461
Tssr148462 17 47728875 to 47728908 33 - TSS region transcription start site region 148462
Tssr145010 17 47729250 to 47729255 5 + TSS region transcription start site region 145010
Tssr145011 17 47729263 to 47729274 11 + TSS region transcription start site region 145011
Tssr145012 17 47729275 to 47729291 16 + TSS region transcription start site region 145012
Tssr148463 17 47729278 to 47729281 3 - TSS region transcription start site region 148463
Tssr145013 17 47729294 to 47729343 49 + TSS region transcription start site region 145013
Tssr5148 17 47729310 to 47729313 3 - TSS region transcription start site region 5148
Tssr148464 17 47729356 to 47729366 10 - TSS region transcription start site region 148464
Tssr145014 17 47730080 to 47730137 57 + TSS region transcription start site region 145014
Tssr148465 17 47730121 to 47730127 6 - TSS region transcription start site region 148465
Tssr148466 17 47730134 to 47730161 27 - TSS region transcription start site region 148466
Tssr145015 17 47730142 to 47730152 10 + TSS region transcription start site region 145015
Tssr145016 17 47730153 to 47730156 3 + TSS region transcription start site region 145016
Tssr145017 17 47730598 to 47730605 7 + TSS region transcription start site region 145017
Tssr145018 17 47730610 to 47730611 1 + TSS region transcription start site region 145018
Tssr148467 17 47730629 to 47730632 3 - TSS region transcription start site region 148467
Tssr145019 17 47730641 to 47730642 1 + TSS region transcription start site region 145019
Tssr148468 17 47730660 to 47730669 9 - TSS region transcription start site region 148468
Tssr145020 17 47730662 to 47730671 9 + TSS region transcription start site region 145020
Tssr145021 17 47730688 to 47730701 13 + TSS region transcription start site region 145021
Tssr145022 17 47730720 to 47730728 8 + TSS region transcription start site region 145022
Tssr145023 17 47730747 to 47730766 19 + TSS region transcription start site region 145023
Tssr148469 17 47730750 to 47730763 13 - TSS region transcription start site region 148469
Tssr145024 17 47730858 to 47730868 10 + TSS region transcription start site region 145024
Tssr145025 17 47731202 to 47731231 29 + TSS region transcription start site region 145025
Tssr145026 17 47731458 to 47731471 13 + TSS region transcription start site region 145026
Tssr5149 17 47731483 to 47731488 5 + TSS region transcription start site region 5149
Tssr145027 17 47732391 to 47732412 21 + TSS region transcription start site region 145027
Tssr145028 17 47732419 to 47732453 34 + TSS region transcription start site region 145028
Tssr148470 17 47732427 to 47732438 11 - TSS region transcription start site region 148470
Tssr148471 17 47732446 to 47732460 14 - TSS region transcription start site region 148471
Tssr145029 17 47732460 to 47732470 10 + TSS region transcription start site region 145029
Tssr148472 17 47732462 to 47732474 12 - TSS region transcription start site region 148472
Tssr148473 17 47732479 to 47732488 9 - TSS region transcription start site region 148473
Tssr148474 17 47732498 to 47732506 8 - TSS region transcription start site region 148474