Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:44750689-45290735

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Runx2 17 44495987 to 44814797 318810 - protein coding gene runt related transcription factor 2
D17Mit137 17 44757247 to 44757339 92 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 137
Cpgi9179 17 44776724 to 44777792 1068 CpG island CpG island 9179
Tssr144761 17 44777127 to 44777198 71 + TSS region transcription start site region 144761
Supt3 17 44777171 to 45119294 342123 + protein coding gene suppressor of Ty 3
Tssr144762 17 44777200 to 44777276 76 + TSS region transcription start site region 144762
Tssr144763 17 44777294 to 44777333 39 + TSS region transcription start site region 144763
Tssr148178 17 44814416 to 44814419 3 - TSS region transcription start site region 148178
Tssr148179 17 44814482 to 44814496 14 - TSS region transcription start site region 148179
Tssr148180 17 44814508 to 44814515 7 - TSS region transcription start site region 148180
Tssr148181 17 44814590 to 44814595 5 - TSS region transcription start site region 148181
Tssr148182 17 44814604 to 44814637 33 - TSS region transcription start site region 148182
Tssr148183 17 44814649 to 44814660 11 - TSS region transcription start site region 148183
Tssr144764 17 44839317 to 44839321 4 + TSS region transcription start site region 144764
4930564C03Rik 17 44879770 to 44880295 525 - protein coding gene RIKEN cDNA 4930564C03 gene
Tssr148184 17 44880830 to 44880831 1 - TSS region transcription start site region 148184
Tssr148185 17 44880833 to 44880838 5 - TSS region transcription start site region 148185
Tssr148186 17 44880841 to 44880858 17 - TSS region transcription start site region 148186
Tssr148187 17 44880871 to 44880874 3 - TSS region transcription start site region 148187
Tssr148188 17 44880876 to 44880890 14 - TSS region transcription start site region 148188
Tssr148189 17 45020689 to 45020735 46 - TSS region transcription start site region 148189
Gm35097 17 45147237 to 45151629 4392 + lincRNA gene predicted gene, 35097
Cpgi9180 17 45159238 to 45159539 301 CpG island CpG island 9180
Gm4766 17 45163230 to 45164168 938 - pseudogene predicted pseudogene 4766
Cpgi9181 17 45163531 to 45163988 457 CpG island CpG island 9181
Gm24979 17 45209966 to 45210091 125 + miRNA gene predicted gene, 24979
Cpgi9182 17 45251340 to 45251666 326 CpG island CpG island 9182
Gm41582 17 45252630 to 45263380 10750 - lncRNA gene predicted gene, 41582
Tssr144765 17 45283190 to 45283220 30 + TSS region transcription start site region 144765