Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:36888792-36968432

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trim40 17 36881598 to 36890123 8525 - protein coding gene tripartite motif-containing 40
Tssr147981 17 36889664 to 36889675 11 - TSS region transcription start site region 147981
Tssr147982 17 36890034 to 36890050 16 - TSS region transcription start site region 147982
Tssr147983 17 36890133 to 36890161 28 - TSS region transcription start site region 147983
Tssr147984 17 36894028 to 36894035 7 - TSS region transcription start site region 147984
Tssr144517 17 36898110 to 36898129 19 + TSS region transcription start site region 144517
Trim31 17 36898130 to 36910217 12087 + protein coding gene tripartite motif-containing 31
Tssr144518 17 36898215 to 36898226 11 + TSS region transcription start site region 144518
Tssr144519 17 36898319 to 36898339 20 + TSS region transcription start site region 144519
Cpgi9145 17 36920296 to 36920459 163 CpG island CpG island 9145
A830092I05Rik 17 36921894 to 36922618 724 unclassified gene RIKEN cDNA A830092I05 gene
1700031A10Rik 17 36923792 to 36933432 9640 + antisense lncRNA gene RIKEN cDNA 1700031A10 gene
Cpgi9146 17 36942548 to 36943637 1089 CpG island CpG island 9146
Tssr144520 17 36942910 to 36942924 14 + TSS region transcription start site region 144520
Tssr144521 17 36943025 to 36943038 13 + TSS region transcription start site region 144521
Rnf39 17 36943051 to 36947986 4935 + protein coding gene ring finger protein 39
Tssr144522 17 36943273 to 36943322 49 + TSS region transcription start site region 144522
Gm33595 17 36943457 to 36947111 3654 - lncRNA gene predicted gene, 33595
Cpgi9147 17 36946847 to 36947759 912 CpG island CpG island 9147
Ppp1r11 17 36948356 to 36951741 3385 - protein coding gene protein phosphatase 1, regulatory inhibitor subunit 11
Tssr147985 17 36951139 to 36951148 9 - TSS region transcription start site region 147985
Tssr147986 17 36951416 to 36951425 9 - TSS region transcription start site region 147986
Cpgi9148 17 36951482 to 36951799 317 CpG island CpG island 9148
Tssr147987 17 36951586 to 36951601 15 - TSS region transcription start site region 147987
Tssr147988 17 36951604 to 36951632 28 - TSS region transcription start site region 147988
Tssr147989 17 36951636 to 36951718 82 - TSS region transcription start site region 147989
Znrd1 17 36954349 to 36958520 4171 - protein coding gene zinc ribbon domain containing, 1
Cpgi9149 17 36957982 to 36958903 921 CpG island CpG island 9149
Tssr147990 17 36958175 to 36958198 23 - TSS region transcription start site region 147990
Tssr147991 17 36958206 to 36958234 28 - TSS region transcription start site region 147991
Tssr147992 17 36958261 to 36958284 23 - TSS region transcription start site region 147992
Tssr147993 17 36958417 to 36958433 16 - TSS region transcription start site region 147993
Tssr147994 17 36958437 to 36958500 63 - TSS region transcription start site region 147994
Tssr147995 17 36958538 to 36958554 16 - TSS region transcription start site region 147995
Tssr144523 17 36958558 to 36958569 11 + TSS region transcription start site region 144523
Tssr144524 17 36958571 to 36958611 40 + TSS region transcription start site region 144524
Znrd1as 17 36958592 to 36965625 7033 + protein coding gene zinc ribbon domain containing 1, antisense
Tssr144525 17 36958623 to 36958630 7 + TSS region transcription start site region 144525
Tssr144526 17 36958655 to 36958751 96 + TSS region transcription start site region 144526
Tssr144527 17 36963788 to 36963797 9 + TSS region transcription start site region 144527
Tssr144528 17 36963822 to 36963837 15 + TSS region transcription start site region 144528
Gm27735 17 36964357 to 36964432 75 - unclassified non-coding RNA gene predicted gene, 27735