Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:36220004-36513417

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9135 17 36225111 to 36225352 241 CpG island CpG island 9135
Gm10074 17 36226023 to 36226271 248 + pseudogene predicted gene 10074
Gm20545 17 36226815 to 36227024 209 - pseudogene predicted gene 20545
Gm29402 17 36228925 to 36228964 39 + pseudogene predicted gene 29402
Gm18604 17 36229474 to 36230020 546 + pseudogene predicted gene, 18604
Cpgi9136 17 36231116 to 36231861 745 CpG island CpG island 9136
Tssr147965 17 36231307 to 36231325 18 - TSS region transcription start site region 147965
Tssr147966 17 36231568 to 36231586 18 - TSS region transcription start site region 147966
Gm20391 17 36237254 to 36237359 105 - pseudogene predicted gene 20391
Cpgi9137 17 36237394 to 36237859 465 CpG island CpG island 9137
Gm22453 17 36241789 to 36242106 317 - unclassified non-coding RNA gene predicted gene, 22453
Gm4252 17 36248636 to 36248948 312 - pseudogene predicted gene 4252
Gm20546 17 36248821 to 36253679 4858 + lincRNA gene predicted gene 20546
Cpgi9138 17 36248863 to 36249219 356 CpG island CpG island 9138
Gm6633 17 36252117 to 36252386 269 - pseudogene predicted gene 6633
Cpgi9139 17 36252276 to 36252607 331 CpG island CpG island 9139
Tssr147967 17 36252487 to 36252503 16 - TSS region transcription start site region 147967
Rpp21 17 36255645 to 36258069 2424 - protein coding gene ribonuclease P 21 subunit
Cpgi9140 17 36257427 to 36257900 473 CpG island CpG island 9140
Tssr147968 17 36257836 to 36257855 19 - TSS region transcription start site region 147968
Tssr147969 17 36257857 to 36257871 14 - TSS region transcription start site region 147969
Trim39 17 36258872 to 36272004 13132 - protein coding gene tripartite motif-containing 39
Tssr147970 17 36263490 to 36263491 1 - TSS region transcription start site region 147970
Cpgi9141 17 36270760 to 36272017 1257 CpG island CpG island 9141
Tssr147971 17 36271089 to 36271102 13 - TSS region transcription start site region 147971
Tssr147972 17 36271115 to 36271145 30 - TSS region transcription start site region 147972
Tssr147973 17 36271354 to 36271365 11 - TSS region transcription start site region 147973
Tssr144510 17 36271432 to 36271483 51 + TSS region transcription start site region 144510
Tssr5115 17 36271799 to 36271813 14 - TSS region transcription start site region 5115
Tssr147974 17 36271829 to 36271857 28 - TSS region transcription start site region 147974
Tssr147975 17 36271877 to 36271921 44 - TSS region transcription start site region 147975
Tssr147976 17 36272244 to 36272248 4 - TSS region transcription start site region 147976
H2-M10.2 17 36284281 to 36286421 2140 - protein coding gene histocompatibility 2, M region locus 10.2
Gm33257 17 36286052 to 36318773 32721 + lncRNA gene predicted gene, 33257
H2-M10.1 17 36322860 to 36326150 3290 - protein coding gene histocompatibility 2, M region locus 10.1
H2-M10.3 17 36365004 to 36368417 3413 - protein coding gene histocompatibility 2, M region locus 10.3
Stk-ps1 17 36397444 to 36398517 1073 - pseudogene serine/threonine kinase, pseudogene 1
H2-M10.5-ps1 17 36407439 to 36409549 2110 - pseudogene histocompatibility 2, M region locus 10.5, pseudogene 1
Lgals1-ps1 17 36435903 to 36436270 367 - pseudogene lectin, galactose binding, soluble 1, pseudogene 1
Rpl9-ps9 17 36444177 to 36444749 572 - pseudogene ribosomal protein L9,pseudogene 9
Obox3-ps8 17 36452294 to 36453253 959 - pseudogene oocyte specific homeobox 3, pseudogene 8
H2-M10.4 17 36458917 to 36462329 3412 - protein coding gene histocompatibility 2, M region locus 10.4
D17Mit125 17 36498157 to 36498299 142 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 125
Gm20452 17 36500360 to 36501581 1221 + pseudogene predicted gene 20452
Gm18809 17 36501027 to 36534495 33468 + pseudogene predicted gene, 18809
Gm20451 17 36507180 to 36508952 1772 + pseudogene predicted gene 20451