Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35849770-35909824

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mdc1 17 35841515 to 35859670 18155 + protein coding gene mediator of DNA damage checkpoint 1
Tssr144424 17 35854832 to 35854841 9 + TSS region transcription start site region 144424
Tssr144425 17 35854886 to 35854892 6 + TSS region transcription start site region 144425
Ppp1r18os 17 35860918 to 35866886 5968 - antisense lncRNA gene protein phosphatase 1, regulatory subunit 18, opposite strand
Cpgi9113 17 35861098 to 35861742 644 CpG island CpG island 9113
Tssr144426 17 35861241 to 35861246 5 + TSS region transcription start site region 144426
Tssr144427 17 35861264 to 35861271 7 + TSS region transcription start site region 144427
Tssr144428 17 35861280 to 35861296 16 + TSS region transcription start site region 144428
Nrm 17 35861318 to 35865400 4082 + protein coding gene nurim (nuclear envelope membrane protein)
Tssr144429 17 35861325 to 35861339 14 + TSS region transcription start site region 144429
Tssr144430 17 35861343 to 35861380 37 + TSS region transcription start site region 144430
Cpgi9114 17 35865497 to 35866892 1395 CpG island CpG island 9114
Ppp1r18 17 35865593 to 35875596 10003 + protein coding gene protein phosphatase 1, regulatory subunit 18
Tssr147911 17 35865704 to 35865707 3 - TSS region transcription start site region 147911
Tssr144431 17 35865787 to 35865843 56 + TSS region transcription start site region 144431
Tssr144432 17 35866071 to 35866085 14 + TSS region transcription start site region 144432
Tssr144433 17 35866121 to 35866144 23 + TSS region transcription start site region 144433
Tssr144434 17 35866152 to 35866203 51 + TSS region transcription start site region 144434
Tssr144435 17 35866245 to 35866256 11 + TSS region transcription start site region 144435
Tssr147912 17 35866493 to 35866511 18 - TSS region transcription start site region 147912
Tssr144436 17 35866606 to 35866675 69 + TSS region transcription start site region 144436
Tssr144437 17 35866677 to 35866699 22 + TSS region transcription start site region 144437
Tssr144438 17 35866700 to 35866719 19 + TSS region transcription start site region 144438
Tssr144439 17 35866821 to 35866832 11 + TSS region transcription start site region 144439
Tssr144440 17 35866842 to 35866852 10 + TSS region transcription start site region 144440
Tssr144441 17 35866855 to 35866877 22 + TSS region transcription start site region 144441
Tssr144442 17 35866932 to 35866946 14 + TSS region transcription start site region 144442
Tssr147913 17 35866948 to 35866960 12 - TSS region transcription start site region 147913
Tssr144443 17 35867041 to 35867058 17 + TSS region transcription start site region 144443
Tssr144444 17 35867149 to 35867166 17 + TSS region transcription start site region 144444
Tssr144445 17 35867179 to 35867233 54 + TSS region transcription start site region 144445
Cpgi9115 17 35867184 to 35867352 168 CpG island CpG island 9115
Tssr144446 17 35867745 to 35867775 30 + TSS region transcription start site region 144446
Tssr144447 17 35867778 to 35867789 11 + TSS region transcription start site region 144447
Tssr144448 17 35868003 to 35868014 11 + TSS region transcription start site region 144448
Tssr147914 17 35868296 to 35868333 37 - TSS region transcription start site region 147914
Gm28033 17 35868302 to 35868397 95 - miRNA gene predicted gene, 28033
Tssr144449 17 35868382 to 35868449 67 + TSS region transcription start site region 144449
Tssr144450 17 35868455 to 35868459 4 + TSS region transcription start site region 144450
Tssr144451 17 35868461 to 35868492 31 + TSS region transcription start site region 144451
Tssr144452 17 35868517 to 35868521 4 + TSS region transcription start site region 144452
Tssr144453 17 35868579 to 35868590 11 + TSS region transcription start site region 144453
Tssr144454 17 35868618 to 35868647 29 + TSS region transcription start site region 144454
Tssr144455 17 35868718 to 35868730 12 + TSS region transcription start site region 144455
Tssr144456 17 35869667 to 35869716 49 + TSS region transcription start site region 144456
Tssr144457 17 35873826 to 35873838 12 + TSS region transcription start site region 144457
Tssr144458 17 35873868 to 35873914 46 + TSS region transcription start site region 144458
Tssr144459 17 35874934 to 35874941 7 + TSS region transcription start site region 144459
Tssr144460 17 35874973 to 35874999 26 + TSS region transcription start site region 144460
Tssr144461 17 35875085 to 35875110 25 + TSS region transcription start site region 144461
Cpgi9116 17 35879435 to 35880291 856 CpG island CpG island 9116
Tssr144462 17 35879770 to 35879824 54 + TSS region transcription start site region 144462
Dhx16 17 35879819 to 35892670 12851 + protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 16
Tssr144463 17 35879825 to 35879845 20 + TSS region transcription start site region 144463
Tssr144464 17 35879895 to 35879909 14 + TSS region transcription start site region 144464
Tssr144465 17 35879953 to 35879962 9 + TSS region transcription start site region 144465
Tssr144466 17 35887872 to 35888023 151 + TSS region transcription start site region 144466
Tssr144467 17 35888125 to 35888139 14 + TSS region transcription start site region 144467
2310061I04Rik 17 35892677 to 35897378 4701 - protein coding gene RIKEN cDNA 2310061I04 gene
Tssr147915 17 35895990 to 35896001 11 - TSS region transcription start site region 147915
Tssr147916 17 35896022 to 35896061 39 - TSS region transcription start site region 147916
Cpgi9117 17 35896676 to 35898046 1370 CpG island CpG island 9117
Tssr147917 17 35897079 to 35897141 62 - TSS region transcription start site region 147917
Tssr147918 17 35897299 to 35897324 25 - TSS region transcription start site region 147918
Tssr147919 17 35897326 to 35897331 5 - TSS region transcription start site region 147919
Tssr147920 17 35897342 to 35897369 27 - TSS region transcription start site region 147920
Tssr147921 17 35897371 to 35897418 47 - TSS region transcription start site region 147921
Atat1 17 35897595 to 35910075 12480 - protein coding gene alpha tubulin acetyltransferase 1
Tssr147922 17 35900721 to 35900740 19 - TSS region transcription start site region 147922
Tssr147923 17 35901435 to 35901452 17 - TSS region transcription start site region 147923
Tssr147924 17 35901543 to 35901569 26 - TSS region transcription start site region 147924
Tssr147925 17 35908907 to 35908924 17 - TSS region transcription start site region 147925
Tssr147926 17 35909224 to 35909246 22 - TSS region transcription start site region 147926
Gm16279 17 35909423 to 35913288 3865 + antisense lncRNA gene predicted gene 16279
Tssr147927 17 35909677 to 35909700 23 - TSS region transcription start site region 147927
Tssr144468 17 35909729 to 35909755 26 + TSS region transcription start site region 144468
Cpgi9118 17 35909789 to 35910176 387 CpG island CpG island 9118