Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35156048-35196055

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prrc2a 17 35149076 to 35164897 15821 - protein coding gene proline-rich coiled-coil 2A
Tssr147767 17 35158035 to 35158047 12 - TSS region transcription start site region 147767
Tssr147768 17 35158439 to 35158455 16 - TSS region transcription start site region 147768
Tssr144257 17 35159046 to 35159097 51 + TSS region transcription start site region 144257
Tssr147769 17 35159153 to 35159198 45 - TSS region transcription start site region 147769
Tssr147770 17 35159393 to 35159410 17 - TSS region transcription start site region 147770
Tssr147771 17 35160795 to 35160835 40 - TSS region transcription start site region 147771
Tssr147772 17 35162313 to 35162337 24 - TSS region transcription start site region 147772
Gm23442 17 35162563 to 35162696 133 - snoRNA gene predicted gene, 23442
Tssr147773 17 35163004 to 35163040 36 - TSS region transcription start site region 147773
Cpgi9084 17 35164210 to 35165436 1226 CpG island CpG island 9084
Tssr147774 17 35164576 to 35164663 87 - TSS region transcription start site region 147774
Tssr147775 17 35164844 to 35164851 7 - TSS region transcription start site region 147775
Tssr147776 17 35164860 to 35164889 29 - TSS region transcription start site region 147776
Tssr147777 17 35164891 to 35164901 10 - TSS region transcription start site region 147777
Tssr147778 17 35165013 to 35165026 13 - TSS region transcription start site region 147778
Gm17705 17 35165119 to 35167186 2067 + lincRNA gene predicted gene, 17705
Tssr147779 17 35165128 to 35165137 9 - TSS region transcription start site region 147779
Tssr147780 17 35165140 to 35165153 13 - TSS region transcription start site region 147780
Tssr147781 17 35165154 to 35165160 6 - TSS region transcription start site region 147781
Tssr147782 17 35165378 to 35165402 24 - TSS region transcription start site region 147782
Tssr144258 17 35170987 to 35170997 10 + TSS region transcription start site region 144258
Aif1 17 35170991 to 35176068 5077 - protein coding gene allograft inflammatory factor 1
Tssr144259 17 35171534 to 35171548 14 + TSS region transcription start site region 144259
Tssr144260 17 35172125 to 35172161 36 + TSS region transcription start site region 144260
Tssr147783 17 35172577 to 35172599 22 - TSS region transcription start site region 147783
Tssr147784 17 35172608 to 35172638 30 - TSS region transcription start site region 147784
Tssr147785 17 35173412 to 35173430 18 - TSS region transcription start site region 147785
Tssr147786 17 35175995 to 35176038 43 - TSS region transcription start site region 147786
Tssr147787 17 35176048 to 35176055 7 - TSS region transcription start site region 147787
Tssr147788 17 35177453 to 35177456 3 - TSS region transcription start site region 147788
Ncr3-ps 17 35180535 to 35184662 4127 + pseudogene natural cytotoxicity triggering receptor 3, pseudogene
Lst1 17 35185095 to 35188439 3344 - protein coding gene leukocyte specific transcript 1
Tssr144261 17 35186862 to 35186912 50 + TSS region transcription start site region 144261
Tssr144262 17 35186934 to 35186974 40 + TSS region transcription start site region 144262
Tssr147789 17 35186965 to 35187006 41 - TSS region transcription start site region 147789
Tssr144263 17 35187956 to 35187964 8 + TSS region transcription start site region 144263
Tssr147790 17 35188427 to 35188446 19 - TSS region transcription start site region 147790
Tssr147791 17 35190234 to 35190258 24 - TSS region transcription start site region 147791
Tssr144264 17 35190356 to 35190377 21 + TSS region transcription start site region 144264
Cpgi9085 17 35193966 to 35194227 261 CpG island CpG island 9085
Tssr144265 17 35194142 to 35194155 13 + TSS region transcription start site region 144265
Tssr144266 17 35194324 to 35194339 15 + TSS region transcription start site region 144266
Tssr144267 17 35194405 to 35194421 16 + TSS region transcription start site region 144267
Tssr144268 17 35194502 to 35194521 19 + TSS region transcription start site region 144268
Ltb 17 35194507 to 35196305 1798 + protein coding gene lymphotoxin B
Tssr144269 17 35194597 to 35194602 5 + TSS region transcription start site region 144269
Tssr144270 17 35194891 to 35194909 18 + TSS region transcription start site region 144270
Tssr144271 17 35194910 to 35194923 13 + TSS region transcription start site region 144271
Mir6973a 17 35194972 to 35195049 77 + miRNA gene microRNA 6973a
Tssr144272 17 35195020 to 35195039 19 + TSS region transcription start site region 144272
Tssr144273 17 35195040 to 35195050 10 + TSS region transcription start site region 144273
Tssr144274 17 35195052 to 35195068 16 + TSS region transcription start site region 144274
Tssr144275 17 35195078 to 35195089 11 + TSS region transcription start site region 144275
Tssr144276 17 35195107 to 35195148 41 + TSS region transcription start site region 144276
Cpgi9086 17 35195311 to 35196467 1156 CpG island CpG island 9086
Tssr144277 17 35195532 to 35195545 13 + TSS region transcription start site region 144277
Tssr147792 17 35195716 to 35195726 10 - TSS region transcription start site region 147792
Tssr144278 17 35195865 to 35195897 32 + TSS region transcription start site region 144278
Tssr144279 17 35195971 to 35195978 7 + TSS region transcription start site region 144279