Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34980848-35020857

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm10501 17 34976899 to 34981788 4889 - antisense lncRNA gene predicted gene 10501
Cpgi9070 17 34981604 to 34982593 989 CpG island CpG island 9070
Tssr147706 17 34981760 to 34981829 69 - TSS region transcription start site region 147706
Tssr144148 17 34981847 to 34981897 50 + TSS region transcription start site region 144148
Lsm2 17 34981862 to 34985891 4029 + protein coding gene LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
Tssr144149 17 34981898 to 34981940 42 + TSS region transcription start site region 144149
Tssr144150 17 34981947 to 34981948 1 + TSS region transcription start site region 144150
Tssr144151 17 34981952 to 34981986 34 + TSS region transcription start site region 144151
Tssr144152 17 34982022 to 34982034 12 + TSS region transcription start site region 144152
Tssr144153 17 34982099 to 34982151 52 + TSS region transcription start site region 144153
Tssr144154 17 34982154 to 34982168 14 + TSS region transcription start site region 144154
Tssr147707 17 34982477 to 34982491 14 - TSS region transcription start site region 147707
Tssr144155 17 34982586 to 34982652 66 + TSS region transcription start site region 144155
Tssr144156 17 34985533 to 34985567 34 + TSS region transcription start site region 144156
Igis1 17 34996678 to 35026741 30063 heritable phenotypic marker immunoglobulin isotype 1
D17H6S56E-5 17 34996678 to 35000746 4068 - protein coding gene DNA segment, Chr 17, human D6S56E 5
Tssr147708 17 34998678 to 34998718 40 - TSS region transcription start site region 147708
Tssr144157 17 34998743 to 34998756 13 + TSS region transcription start site region 144157
Tssr147709 17 34999234 to 34999255 21 - TSS region transcription start site region 147709
Tssr147710 17 34999309 to 34999341 32 - TSS region transcription start site region 147710
Tssr147711 17 34999436 to 34999449 13 - TSS region transcription start site region 147711
Cpgi9071 17 34999973 to 35000176 203 CpG island CpG island 9071
Tssr147712 17 35000027 to 35000037 10 - TSS region transcription start site region 147712
Tssr147713 17 35000368 to 35000411 43 - TSS region transcription start site region 147713
Cpgi9072 17 35000729 to 35001848 1119 CpG island CpG island 9072
Tssr147714 17 35000777 to 35000801 24 - TSS region transcription start site region 147714
Tssr147715 17 35000808 to 35000836 28 - TSS region transcription start site region 147715
Tssr147716 17 35000848 to 35000857 9 - TSS region transcription start site region 147716
Tssr144158 17 35000902 to 35000930 28 + TSS region transcription start site region 144158
Tssr144159 17 35000933 to 35000944 11 + TSS region transcription start site region 144159
Tssr144160 17 35000946 to 35000962 16 + TSS region transcription start site region 144160
Tssr144161 17 35000965 to 35000976 11 + TSS region transcription start site region 144161
Vars 17 35000987 to 35016322 15335 + protein coding gene valyl-tRNA synthetase
Tssr144162 17 35001023 to 35001097 74 + TSS region transcription start site region 144162
Tssr144163 17 35001098 to 35001161 63 + TSS region transcription start site region 144163
Tssr144164 17 35001282 to 35001347 65 + TSS region transcription start site region 144164
Tssr144165 17 35001349 to 35001371 22 + TSS region transcription start site region 144165
Tssr144166 17 35001380 to 35001423 43 + TSS region transcription start site region 144166
Tssr144167 17 35001568 to 35001582 14 + TSS region transcription start site region 144167
Tssr147717 17 35001942 to 35001960 18 - TSS region transcription start site region 147717
D17Nki5 17 35001985 to 35002164 179 DNA segment DNA segment, Chr 17, Netherlands Cancer Institute 5
Tssr147718 17 35002578 to 35002590 12 - TSS region transcription start site region 147718
D17Nki6 17 35003051 to 35003228 177 DNA segment DNA segment, Chr 17, Netherlands Cancer Institute 6
Tssr144168 17 35004681 to 35004690 9 + TSS region transcription start site region 144168
Tssr144169 17 35004695 to 35004728 33 + TSS region transcription start site region 144169
Tssr144170 17 35016518 to 35016546 28 + TSS region transcription start site region 144170
Tssr144171 17 35016576 to 35016604 28 + TSS region transcription start site region 144171
Vwa7 17 35016579 to 35026741 10162 + protein coding gene von Willebrand factor A domain containing 7