Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34631118-34731363

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prrt1 17 34629533 to 34633126 3593 + protein coding gene proline-rich transmembrane protein 1
Cpgi9050 17 34630422 to 34631365 943 CpG island CpG island 9050
Tssr144094 17 34631092 to 34631147 55 + TSS region transcription start site region 144094
Cpgi9051 17 34631793 to 34632573 780 CpG island CpG island 9051
Tssr144095 17 34632303 to 34632314 11 + TSS region transcription start site region 144095
Tssr147628 17 34632372 to 34632410 38 - TSS region transcription start site region 147628
Tssr147629 17 34637972 to 34637981 9 - TSS region transcription start site region 147629
Tssr147630 17 34637985 to 34638060 75 - TSS region transcription start site region 147630
Tssr147631 17 34638064 to 34638082 18 - TSS region transcription start site region 147631
Tssr144096 17 34639789 to 34639800 11 + TSS region transcription start site region 144096
Gm20461 17 34640846 to 34643977 3131 - lincRNA gene predicted gene 20461
Tssr144097 17 34643938 to 34643947 9 + TSS region transcription start site region 144097
Tssr144098 17 34643955 to 34643959 4 + TSS region transcription start site region 144098
Tssr144099 17 34643962 to 34643971 9 + TSS region transcription start site region 144099
Cpgi9052 17 34644654 to 34644817 163 CpG island CpG island 9052
Fkbpl 17 34644764 to 34646324 1560 + protein coding gene FK506 binding protein-like
Tssr144100 17 34644781 to 34644797 16 + TSS region transcription start site region 144100
Tssr144101 17 34644805 to 34644870 65 + TSS region transcription start site region 144101
Cpgi9053 17 34646880 to 34647747 867 CpG island CpG island 9053
Tssr144102 17 34647121 to 34647122 1 + TSS region transcription start site region 144102
Tssr144103 17 34647128 to 34647173 45 + TSS region transcription start site region 144103
Atf6b 17 34647146 to 34655074 7928 + protein coding gene activating transcription factor 6 beta
Tssr144104 17 34647187 to 34647216 29 + TSS region transcription start site region 144104
Tssr144105 17 34647649 to 34647679 30 + TSS region transcription start site region 144105
Tssr144106 17 34648239 to 34648271 32 + TSS region transcription start site region 144106
Tssr147632 17 34659483 to 34659485 2 - TSS region transcription start site region 147632
Tssr144107 17 34660457 to 34660516 59 + TSS region transcription start site region 144107
Tssr144108 17 34661610 to 34661617 7 + TSS region transcription start site region 144108
Tssr144109 17 34661652 to 34661661 9 + TSS region transcription start site region 144109
Tnxb 17 34670535 to 34719815 49280 + protein coding gene tenascin XB
Cpgi9054 17 34671007 to 34672943 1936 CpG island CpG island 9054
Cpgi9055 17 34679932 to 34680690 758 CpG island CpG island 9055
Cpgi9056 17 34681118 to 34681363 245 CpG island CpG island 9056
Tssr144110 17 34681404 to 34681416 12 + TSS region transcription start site region 144110
Gm24389 17 34687696 to 34687802 106 - snRNA gene predicted gene, 24389
Cyp21a2-ps 17 34719813 to 34722252 2439 - pseudogene cytochrome P450, family 21, subfamily a, polypeptide 2 pseudogene
Tssr5096 17 34722382 to 34722389 7 - TSS region transcription start site region 5096
Tssr147633 17 34722408 to 34722421 13 - TSS region transcription start site region 147633
C4b 17 34728380 to 34743882 15502 - protein coding gene complement component 4B (Chido blood group)
Tssr147634 17 34729387 to 34729397 10 - TSS region transcription start site region 147634
Tssr147635 17 34729880 to 34729904 24 - TSS region transcription start site region 147635
Tssr147636 17 34729982 to 34730016 34 - TSS region transcription start site region 147636