Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34213914-34263964

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tap2 17 34204479 to 34216321 11842 + protein coding gene transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
Gm15821 17 34211312 to 34214459 3147 - protein coding gene predicted gene 15821
Cpgi9037 17 34214056 to 34214249 193 CpG island CpG island 9037
Tssr147542 17 34214471 to 34214486 15 - TSS region transcription start site region 147542
Tssr143948 17 34214902 to 34214908 6 + TSS region transcription start site region 143948
Tssr143949 17 34238896 to 34238911 15 + TSS region transcription start site region 143949
H2-Ob 17 34238903 to 34245907 7004 + protein coding gene histocompatibility 2, O region beta locus
Tssr143950 17 34238914 to 34238964 50 + TSS region transcription start site region 143950
Tssr147543 17 34239675 to 34239689 14 - TSS region transcription start site region 147543
Tssr147544 17 34239704 to 34239718 14 - TSS region transcription start site region 147544
Tssr147545 17 34239720 to 34239735 15 - TSS region transcription start site region 147545
Tssr143951 17 34239871 to 34239881 10 + TSS region transcription start site region 143951
Tssr143952 17 34240015 to 34240057 42 + TSS region transcription start site region 143952
Sxbq3 17 34243234 to 34243371 137 QTL SGC/Knj cross B6 QTL 3
Leusq6 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 6
Sst6 17 34243234 to 34333707 90473 QTL susceptibility to tuberculosis 6
Char3 17 34243234 to 34243371 137 QTL P. chabaudi malaria resistance QTL 3
D17Mit21 17 34243234 to 34243371 137 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 21
Leusq3 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 3
Gm20506 17 34249057 to 34250264 1207 + lincRNA gene predicted gene 20506
Tssr143953 17 34256710 to 34256722 12 + TSS region transcription start site region 143953
Tssr143954 17 34257877 to 34257888 11 + TSS region transcription start site region 143954
Tssr143955 17 34257934 to 34257965 31 + TSS region transcription start site region 143955
Tssr147546 17 34261588 to 34261593 5 - TSS region transcription start site region 147546
Tssr147547 17 34261613 to 34261627 14 - TSS region transcription start site region 147547
Tssr147548 17 34261630 to 34261644 14 - TSS region transcription start site region 147548
Tssr143956 17 34261801 to 34261829 28 + TSS region transcription start site region 143956
Tssr143957 17 34261847 to 34261851 4 + TSS region transcription start site region 143957
Tssr143958 17 34261853 to 34261858 5 + TSS region transcription start site region 143958
Tssr147549 17 34263047 to 34263056 9 - TSS region transcription start site region 147549
Tssr147550 17 34263091 to 34263111 20 - TSS region transcription start site region 147550
Tssr143959 17 34263224 to 34263256 32 + TSS region transcription start site region 143959
H2-Ab1 17 34263227 to 34269418 6191 + protein coding gene histocompatibility 2, class II antigen A, beta 1