Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34188234-34298371

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133 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9032 17 34186985 to 34188438 1453 CpG island CpG island 9032
Tap1 17 34187556 to 34197225 9669 + protein coding gene transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143928 17 34193310 to 34193324 14 + TSS region transcription start site region 143928
Tssr143929 17 34196845 to 34196858 13 + TSS region transcription start site region 143929
Cpgi9033 17 34197385 to 34197888 503 CpG island CpG island 9033
Tssr143930 17 34197715 to 34197728 13 + TSS region transcription start site region 143930
Tssr5093 17 34197733 to 34197761 28 + TSS region transcription start site region 5093
Cpgi9034 17 34198159 to 34198783 624 CpG island CpG island 9034
Tssr143931 17 34198179 to 34198206 27 + TSS region transcription start site region 143931
Psmb8 17 34198195 to 34201454 3259 + protein coding gene proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
Tssr143932 17 34198342 to 34198384 42 + TSS region transcription start site region 143932
Tssr143933 17 34198385 to 34198400 15 + TSS region transcription start site region 143933
Tssr143934 17 34198604 to 34198620 16 + TSS region transcription start site region 143934
Gm20496 17 34199316 to 34205449 6133 - antisense lncRNA gene predicted gene 20496
D17Mit1001 17 34199761 to 34199863 102 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1001
Tssr143935 17 34200707 to 34200729 22 + TSS region transcription start site region 143935
Tssr143936 17 34200861 to 34200872 11 + TSS region transcription start site region 143936
Tssr147541 17 34201437 to 34201453 16 - TSS region transcription start site region 147541
Tssr143937 17 34204092 to 34204110 18 + TSS region transcription start site region 143937
Cpgi9035 17 34204386 to 34205150 764 CpG island CpG island 9035
Tssr143938 17 34204477 to 34204500 23 + TSS region transcription start site region 143938
Tap2 17 34204479 to 34216321 11842 + protein coding gene transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143939 17 34204507 to 34204573 66 + TSS region transcription start site region 143939
Tssr143940 17 34204584 to 34204593 9 + TSS region transcription start site region 143940
Tssr143941 17 34204831 to 34204864 33 + TSS region transcription start site region 143941
Tssr143942 17 34205556 to 34205574 18 + TSS region transcription start site region 143942
Tssr143943 17 34208386 to 34208394 8 + TSS region transcription start site region 143943
Tssr143944 17 34208752 to 34208773 21 + TSS region transcription start site region 143944
Tssr143945 17 34208778 to 34208792 14 + TSS region transcription start site region 143945
Gm15821 17 34211312 to 34214459 3147 - protein coding gene predicted gene 15821
Cpgi9036 17 34211834 to 34212060 226 CpG island CpG island 9036
Tssr143946 17 34211940 to 34211945 5 + TSS region transcription start site region 143946
Tssr5094 17 34211962 to 34211969 7 + TSS region transcription start site region 5094
Tssr143947 17 34211972 to 34211994 22 + TSS region transcription start site region 143947
Cpgi9037 17 34214056 to 34214249 193 CpG island CpG island 9037
Tssr147542 17 34214471 to 34214486 15 - TSS region transcription start site region 147542
Tssr143948 17 34214902 to 34214908 6 + TSS region transcription start site region 143948
Tssr143949 17 34238896 to 34238911 15 + TSS region transcription start site region 143949
H2-Ob 17 34238903 to 34245907 7004 + protein coding gene histocompatibility 2, O region beta locus
Tssr143950 17 34238914 to 34238964 50 + TSS region transcription start site region 143950
Tssr147543 17 34239675 to 34239689 14 - TSS region transcription start site region 147543
Tssr147544 17 34239704 to 34239718 14 - TSS region transcription start site region 147544
Tssr147545 17 34239720 to 34239735 15 - TSS region transcription start site region 147545
Tssr143951 17 34239871 to 34239881 10 + TSS region transcription start site region 143951
Tssr143952 17 34240015 to 34240057 42 + TSS region transcription start site region 143952
Char3 17 34243234 to 34243371 137 QTL P. chabaudi malaria resistance QTL 3
D17Mit21 17 34243234 to 34243371 137 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 21
Sst6 17 34243234 to 34333707 90473 QTL susceptibility to tuberculosis 6
Sxbq3 17 34243234 to 34243371 137 QTL SGC/Knj cross B6 QTL 3
Leusq6 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 6
Leusq3 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 3
Gm20506 17 34249057 to 34250264 1207 + lincRNA gene predicted gene 20506
Tssr143953 17 34256710 to 34256722 12 + TSS region transcription start site region 143953
Tssr143954 17 34257877 to 34257888 11 + TSS region transcription start site region 143954
Tssr143955 17 34257934 to 34257965 31 + TSS region transcription start site region 143955
Tssr147546 17 34261588 to 34261593 5 - TSS region transcription start site region 147546
Tssr147547 17 34261613 to 34261627 14 - TSS region transcription start site region 147547
Tssr147548 17 34261630 to 34261644 14 - TSS region transcription start site region 147548
Tssr143956 17 34261801 to 34261829 28 + TSS region transcription start site region 143956
Tssr143957 17 34261847 to 34261851 4 + TSS region transcription start site region 143957
Tssr143958 17 34261853 to 34261858 5 + TSS region transcription start site region 143958
Tssr147549 17 34263047 to 34263056 9 - TSS region transcription start site region 147549
Tssr147550 17 34263091 to 34263111 20 - TSS region transcription start site region 147550
Tssr143959 17 34263224 to 34263256 32 + TSS region transcription start site region 143959
H2-Ab1 17 34263227 to 34269418 6191 + protein coding gene histocompatibility 2, class II antigen A, beta 1
Tssr147551 17 34264128 to 34264147 19 - TSS region transcription start site region 147551
Cpgi9038 17 34264226 to 34265490 1264 CpG island CpG island 9038
Tssr143960 17 34264242 to 34264284 42 + TSS region transcription start site region 143960
Tssr143961 17 34264397 to 34264410 13 + TSS region transcription start site region 143961
Tssr143962 17 34264527 to 34264564 37 + TSS region transcription start site region 143962
Tssr143963 17 34264758 to 34264768 10 + TSS region transcription start site region 143963
Tssr143964 17 34264780 to 34264796 16 + TSS region transcription start site region 143964
Tssr143965 17 34264802 to 34264813 11 + TSS region transcription start site region 143965
Tssr143966 17 34264820 to 34264838 18 + TSS region transcription start site region 143966
Tssr147552 17 34264829 to 34264872 43 - TSS region transcription start site region 147552
D17Dgm2 17 34264832 to 34265032 200 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 2
Tssr143967 17 34264847 to 34264860 13 + TSS region transcription start site region 143967
Tssr143968 17 34264880 to 34264891 11 + TSS region transcription start site region 143968
Tssr143969 17 34264905 to 34264930 25 + TSS region transcription start site region 143969
Tssr143970 17 34264935 to 34264958 23 + TSS region transcription start site region 143970
Tssr147553 17 34264994 to 34265015 21 - TSS region transcription start site region 147553
Tssr143971 17 34264998 to 34265008 10 + TSS region transcription start site region 143971
Tssr143972 17 34267327 to 34267345 18 + TSS region transcription start site region 143972
Tssr143973 17 34267365 to 34267383 18 + TSS region transcription start site region 143973
Tssr147554 17 34267465 to 34267475 10 - TSS region transcription start site region 147554
Tssr143974 17 34267469 to 34267484 15 + TSS region transcription start site region 143974
Tssr143975 17 34267502 to 34267512 10 + TSS region transcription start site region 143975
Tssr143976 17 34267547 to 34267568 21 + TSS region transcription start site region 143976
Tssr143977 17 34267919 to 34267930 11 + TSS region transcription start site region 143977
Tssr143978 17 34267967 to 34267974 7 + TSS region transcription start site region 143978
Tssr143979 17 34267994 to 34268005 11 + TSS region transcription start site region 143979
Tssr143980 17 34268662 to 34268667 5 + TSS region transcription start site region 143980
Tssr143981 17 34268675 to 34268685 10 + TSS region transcription start site region 143981
Tssr143982 17 34269077 to 34269104 27 + TSS region transcription start site region 143982
Tssr143983 17 34269118 to 34269127 9 + TSS region transcription start site region 143983
Tssr143984 17 34269141 to 34269201 60 + TSS region transcription start site region 143984
Tssr143985 17 34269202 to 34269239 37 + TSS region transcription start site region 143985
Tssr147555 17 34269224 to 34269263 39 - TSS region transcription start site region 147555
Tssr143986 17 34269256 to 34269261 5 + TSS region transcription start site region 143986
Tssr147556 17 34269322 to 34269337 15 - TSS region transcription start site region 147556
Tssr147557 17 34269363 to 34269388 25 - TSS region transcription start site region 147557
Tssr147558 17 34269407 to 34269410 3 - TSS region transcription start site region 147558
H2-Aa 17 34282751 to 34287771 5020 - protein coding gene histocompatibility 2, class II antigen A, alpha
Tssr143987 17 34282752 to 34282766 14 + TSS region transcription start site region 143987
Tssr147559 17 34282887 to 34282896 9 - TSS region transcription start site region 147559
Tssr147560 17 34282915 to 34282926 11 - TSS region transcription start site region 147560
Tssr147561 17 34282970 to 34283010 40 - TSS region transcription start site region 147561
Tssr147562 17 34283011 to 34283031 20 - TSS region transcription start site region 147562
Tssr147563 17 34283176 to 34283188 12 - TSS region transcription start site region 147563
Tssr147564 17 34283306 to 34283315 9 - TSS region transcription start site region 147564
Tssr147565 17 34283670 to 34283723 53 - TSS region transcription start site region 147565
Tssr147566 17 34283766 to 34283785 19 - TSS region transcription start site region 147566
Tssr147567 17 34284434 to 34284521 87 - TSS region transcription start site region 147567
Tssr143988 17 34286191 to 34286199 8 + TSS region transcription start site region 143988
Tssr147568 17 34287110 to 34287153 43 - TSS region transcription start site region 147568
Tssr147569 17 34287770 to 34287830 60 - TSS region transcription start site region 147569
Tssr143989 17 34287971 to 34287983 12 + TSS region transcription start site region 143989
Tssr147570 17 34287992 to 34288021 29 - TSS region transcription start site region 147570
Tssr143990 17 34288019 to 34288025 6 + TSS region transcription start site region 143990
Tssr147571 17 34291677 to 34291716 39 - TSS region transcription start site region 147571
Tssr143991 17 34291818 to 34291828 10 + TSS region transcription start site region 143991
Tssr143992 17 34291854 to 34291855 1 + TSS region transcription start site region 143992
Tssr143993 17 34291867 to 34291872 5 + TSS region transcription start site region 143993
Gm20513 17 34293073 to 34305720 12647 - lincRNA gene predicted gene 20513
Tssr147572 17 34293423 to 34293430 7 - TSS region transcription start site region 147572
Tssr147573 17 34293710 to 34293726 16 - TSS region transcription start site region 147573
Tssr143994 17 34293841 to 34293848 7 + TSS region transcription start site region 143994
Tssr143995 17 34293868 to 34293880 12 + TSS region transcription start site region 143995
Tssr143996 17 34293906 to 34293917 11 + TSS region transcription start site region 143996
Tssr143997 17 34293921 to 34293934 13 + TSS region transcription start site region 143997
Tssr147574 17 34296071 to 34296074 3 - TSS region transcription start site region 147574
Tssr147575 17 34296106 to 34296120 14 - TSS region transcription start site region 147575
Tssr147576 17 34296165 to 34296178 13 - TSS region transcription start site region 147576