Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:33792965-33893594

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr147459 17 33799327 to 33799335 8 - TSS region transcription start site region 147459
Cpgi9005 17 33810438 to 33811004 566 CpG island CpG island 9005
Tssr143795 17 33810515 to 33810529 14 + TSS region transcription start site region 143795
Kank3 17 33810523 to 33822920 12397 + protein coding gene KN motif and ankyrin repeat domains 3
D17Mit82 17 33810969 to 33811104 135 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 82
Sm2 17 33810969 to 33811104 135 QTL susceptibility to Schistosoma mansoni infection 2
Cpgi9006 17 33816937 to 33818438 1501 CpG island CpG island 9006
Tssr143796 17 33817705 to 33817716 11 + TSS region transcription start site region 143796
Tssr143797 17 33817806 to 33817834 28 + TSS region transcription start site region 143797
Tssr143798 17 33817835 to 33817866 31 + TSS region transcription start site region 143798
Rps28 17 33823036 to 33824562 1526 - protein coding gene ribosomal protein S28
Cpgi9007 17 33824231 to 33824934 703 CpG island CpG island 9007
Tssr147460 17 33824430 to 33824473 43 - TSS region transcription start site region 147460
Tssr147461 17 33824529 to 33824538 9 - TSS region transcription start site region 147461
Tssr143799 17 33824562 to 33824598 36 + TSS region transcription start site region 143799
Ndufa7 17 33824572 to 33838316 13744 + protein coding gene NADH:ubiquinone oxidoreductase subunit A7
Tssr143800 17 33824609 to 33824644 35 + TSS region transcription start site region 143800
Tssr143801 17 33824890 to 33824922 32 + TSS region transcription start site region 143801
Tssr143802 17 33829231 to 33829242 11 + TSS region transcription start site region 143802
Cpgi9008 17 33842965 to 33843594 629 CpG island CpG island 9008
Tssr143803 17 33843085 to 33843129 44 + TSS region transcription start site region 143803
Cd320 17 33843091 to 33849774 6683 + protein coding gene CD320 antigen
Tssr143804 17 33843137 to 33843156 19 + TSS region transcription start site region 143804
BE135129 17 33851039 to 33851542 503 DNA segment expressed sequence BE135129
Gm4134 17 33861302 to 33864228 2926 - pseudogene predicted gene 4134
Smim40-ps 17 33873837 to 33874082 245 + pseudogene small integral membrane protein 40, pseudogene
Kifc1 17 33875664 to 33890633 14969 - protein coding gene kinesin family member C1
Gm27740 17 33886676 to 33886733 57 - miRNA gene predicted gene, 27740
Cpgi9009 17 33890052 to 33891100 1048 CpG island CpG island 9009
Tssr147462 17 33890544 to 33890560 16 - TSS region transcription start site region 147462
Tssr147463 17 33890584 to 33890652 68 - TSS region transcription start site region 147463
Tssr143805 17 33893192 to 33893220 28 + TSS region transcription start site region 143805