Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:31208196-31309681

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ubash3a 17 31207873 to 31242202 34329 + protein coding gene ubiquitin associated and SH3 domain containing, A
Tssr147277 17 31208797 to 31208805 8 - TSS region transcription start site region 147277
Tssr147278 17 31208813 to 31208835 22 - TSS region transcription start site region 147278
Tssr143655 17 31212106 to 31212121 15 + TSS region transcription start site region 143655
Tssr143656 17 31247323 to 31247334 11 + TSS region transcription start site region 143656
Rsph1 17 31255019 to 31277356 22337 - protein coding gene radial spoke head 1 homolog (Chlamydomonas)
Gm30090 17 31258196 to 31259681 1485 + lncRNA gene predicted gene, 30090
Tssr147279 17 31260508 to 31260512 4 - TSS region transcription start site region 147279
Tssr147280 17 31265868 to 31265878 10 - TSS region transcription start site region 147280
Tssr147281 17 31268354 to 31268358 4 - TSS region transcription start site region 147281
Cpgi8942 17 31276927 to 31277545 618 CpG island CpG island 8942
Tssr147282 17 31277257 to 31277325 68 - TSS region transcription start site region 147282
Tssr147283 17 31277327 to 31277352 25 - TSS region transcription start site region 147283
Tssr5082 17 31277378 to 31277382 4 - TSS region transcription start site region 5082
Tssr147284 17 31277389 to 31277404 15 - TSS region transcription start site region 147284
Gm8437 17 31278503 to 31299821 21318 unclassified gene predicted gene 8437
Gm30139 17 31285484 to 31292441 6957 - lncRNA gene predicted gene, 30139
Slc37a1 17 31295483 to 31350696 55213 + protein coding gene solute carrier family 37 (glycerol-3-phosphate transporter), member 1
Cpgi8943 17 31295770 to 31296893 1123 CpG island CpG island 8943
Tssr5083 17 31295806 to 31295819 13 + TSS region transcription start site region 5083
Tssr143657 17 31296191 to 31296253 62 + TSS region transcription start site region 143657
Tssr147285 17 31296623 to 31296646 23 - TSS region transcription start site region 147285
Tssr147286 17 31296650 to 31296666 16 - TSS region transcription start site region 147286
Tssr143658 17 31296722 to 31296794 72 + TSS region transcription start site region 143658
Tssr143659 17 31296796 to 31296816 20 + TSS region transcription start site region 143659
Tssr143660 17 31296986 to 31296999 13 + TSS region transcription start site region 143660