Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:29489788-29666894

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hst4 17 26286363 to 29495465 3209102 heritable phenotypic marker hybrid sterility 4
Cpgi8920 17 29489722 to 29492243 2521 CpG island CpG island 8920
Tssr143556 17 29489800 to 29489817 17 + TSS region transcription start site region 143556
Tssr147226 17 29490284 to 29490310 26 - TSS region transcription start site region 147226
Tssr143557 17 29490468 to 29490475 7 + TSS region transcription start site region 143557
Tssr143558 17 29490606 to 29490616 10 + TSS region transcription start site region 143558
Tssr143559 17 29490637 to 29490655 18 + TSS region transcription start site region 143559
Tssr143560 17 29490688 to 29490700 12 + TSS region transcription start site region 143560
Tssr143561 17 29490752 to 29490767 15 + TSS region transcription start site region 143561
Tssr143562 17 29490775 to 29490799 24 + TSS region transcription start site region 143562
Tssr143563 17 29490823 to 29490839 16 + TSS region transcription start site region 143563
Tssr143564 17 29490846 to 29490862 16 + TSS region transcription start site region 143564
Tssr143565 17 29490904 to 29490915 11 + TSS region transcription start site region 143565
Pim1 17 29491045 to 29495465 4420 + protein coding gene proviral integration site 1
Hst6 17 29491045 to 31681724 2190679 heritable phenotypic marker hybrid sterility 6
Tssr143566 17 29491343 to 29491357 14 + TSS region transcription start site region 143566
Tssr143567 17 29491642 to 29491673 31 + TSS region transcription start site region 143567
Tssr143568 17 29491725 to 29491738 13 + TSS region transcription start site region 143568
Tssr143569 17 29491787 to 29491798 11 + TSS region transcription start site region 143569
Tssr143570 17 29491800 to 29491805 5 + TSS region transcription start site region 143570
D17Mit23 17 29492190 to 29492323 133 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 23
Pas19 17 29492190 to 34535463 5043273 QTL pulmonary adenoma susceptibility 19
Tssr147227 17 29492342 to 29492376 34 - TSS region transcription start site region 147227
Tssr147228 17 29492840 to 29492859 19 - TSS region transcription start site region 147228
Tssr143571 17 29492997 to 29493009 12 + TSS region transcription start site region 143571
Tssr143572 17 29493037 to 29493105 68 + TSS region transcription start site region 143572
Tssr143573 17 29493114 to 29493128 14 + TSS region transcription start site region 143573
Tssr143574 17 29493132 to 29493143 11 + TSS region transcription start site region 143574
Tssr143575 17 29493169 to 29493183 14 + TSS region transcription start site region 143575
Tssr143576 17 29494500 to 29494523 23 + TSS region transcription start site region 143576
Tssr143577 17 29494627 to 29494639 12 + TSS region transcription start site region 143577
Tssr143578 17 29494916 to 29494942 26 + TSS region transcription start site region 143578
Tssr143579 17 29495635 to 29495657 22 + TSS region transcription start site region 143579
Gm17657 17 29518642 to 29549638 30996 - protein coding gene predicted gene, 17657
Cpgi8921 17 29519283 to 29519692 409 CpG island CpG island 8921
Tssr147229 17 29519823 to 29519853 30 - TSS region transcription start site region 147229
Tmem217 17 29526007 to 29552385 26378 - protein coding gene transmembrane protein 217
Tssr147230 17 29549588 to 29549598 10 - TSS region transcription start site region 147230
Tssr147231 17 29549631 to 29549643 12 - TSS region transcription start site region 147231
Cpgi8922 17 29549639 to 29550263 624 CpG island CpG island 8922
Tssr143580 17 29549783 to 29549798 15 + TSS region transcription start site region 143580
Tbc1d22b 17 29549788 to 29606894 57106 + protein coding gene TBC1 domain family, member 22B
Gm28052 17 29549799 to 29682012 132213 + unclassified non-coding RNA gene predicted gene, 28052
Tbc1d22bos 17 29578816 to 29596305 17489 - antisense lncRNA gene TBC1 domain family, member 22B, opposite strand
Tssr147232 17 29579429 to 29579451 22 - TSS region transcription start site region 147232
Mir7667 17 29595538 to 29595600 62 + miRNA gene microRNA 7667
2010106G04Rik 17 29614467 to 29614768 301 unclassified gene RIKEN cDNA 2010106G04 gene
Cpgi8923 17 29614519 to 29615621 1102 CpG island CpG island 8923
Tssr143581 17 29614786 to 29614797 11 + TSS region transcription start site region 143581
Rnf8 17 29614789 to 29641664 26875 + protein coding gene ring finger protein 8
Tssr143582 17 29614800 to 29614844 44 + TSS region transcription start site region 143582
Tssr143583 17 29614848 to 29614928 80 + TSS region transcription start site region 143583
Gm28043 17 29614876 to 29703359 88483 + protein coding gene predicted gene, 28043
Tssr143584 17 29614947 to 29614958 11 + TSS region transcription start site region 143584
4930563A19Rik 17 29615282 to 29615547 265 unclassified gene RIKEN cDNA 4930563A19 gene
Tssr143585 17 29637005 to 29637047 42 + TSS region transcription start site region 143585
Gm20161 17 29652228 to 29658336 6108 - lncRNA gene predicted gene, 20161
Tssr147233 17 29658304 to 29658334 30 - TSS region transcription start site region 147233
Tssr147234 17 29658337 to 29658352 15 - TSS region transcription start site region 147234
Cpgi8924 17 29660400 to 29661312 912 CpG island CpG island 8924
Cmtr1 17 29660595 to 29705979 45384 + protein coding gene cap methyltransferase 1
Tssr143586 17 29660614 to 29660706 92 + TSS region transcription start site region 143586
Tssr143587 17 29660710 to 29660721 11 + TSS region transcription start site region 143587
Tssr143588 17 29662246 to 29662250 4 + TSS region transcription start site region 143588