Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:29344402-29444435

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mtch1 17 29332076 to 29347927 15851 - protein coding gene mitochondrial carrier 1
Cpgi8915 17 29347194 to 29348222 1028 CpG island CpG island 8915
Tssr147198 17 29347753 to 29347792 39 - TSS region transcription start site region 147198
Tssr147199 17 29347800 to 29347811 11 - TSS region transcription start site region 147199
Tssr147200 17 29347902 to 29347940 38 - TSS region transcription start site region 147200
Tssr143529 17 29347990 to 29348001 11 + TSS region transcription start site region 143529
Tssr143530 17 29348016 to 29348030 14 + TSS region transcription start site region 143530
Fgd2 17 29360904 to 29379535 18631 + protein coding gene FYVE, RhoGEF and PH domain containing 2
Tssr143531 17 29360909 to 29360920 11 + TSS region transcription start site region 143531
Tssr143532 17 29360923 to 29360940 17 + TSS region transcription start site region 143532
Tssr143533 17 29360956 to 29360968 12 + TSS region transcription start site region 143533
Tssr143534 17 29360969 to 29360982 13 + TSS region transcription start site region 143534
Tssr147201 17 29368845 to 29368851 6 - TSS region transcription start site region 147201
Tssr143535 17 29368957 to 29368983 26 + TSS region transcription start site region 143535
Tssr143536 17 29368989 to 29369008 19 + TSS region transcription start site region 143536
Tssr143537 17 29369181 to 29369202 21 + TSS region transcription start site region 143537
Tssr143538 17 29370601 to 29370622 21 + TSS region transcription start site region 143538
Tssr143539 17 29376259 to 29376274 15 + TSS region transcription start site region 143539
Tssr143540 17 29381749 to 29381755 6 + TSS region transcription start site region 143540
Cpgi8916 17 29389139 to 29389612 473 CpG island CpG island 8916
Tssr147202 17 29393668 to 29393675 7 - TSS region transcription start site region 147202
Tssr143541 17 29393845 to 29393851 6 + TSS region transcription start site region 143541
Tssr143542 17 29393859 to 29393888 29 + TSS region transcription start site region 143542
Tssr143543 17 29394402 to 29394435 33 + TSS region transcription start site region 143543
Tssr147203 17 29395521 to 29395528 7 - TSS region transcription start site region 147203
Tssr143544 17 29395713 to 29395729 16 + TSS region transcription start site region 143544
Cpgi8917 17 29398097 to 29398453 356 CpG island CpG island 8917
Tssr147204 17 29398115 to 29398146 31 - TSS region transcription start site region 147204
Tssr143545 17 29398464 to 29398487 23 + TSS region transcription start site region 143545
Tssr147205 17 29403345 to 29403358 13 - TSS region transcription start site region 147205
Tssr147206 17 29411177 to 29411226 49 - TSS region transcription start site region 147206
Cpgi8918 17 29416129 to 29416554 425 CpG island CpG island 8918
Tssr147207 17 29423889 to 29423893 4 - TSS region transcription start site region 147207
Asrq8a 17 29427987 to 29427987 0 QTL acoustic startle response 8a
Tssr147208 17 29428961 to 29428975 14 - TSS region transcription start site region 147208
Tssr143546 17 29429077 to 29429099 22 + TSS region transcription start site region 143546
Tssr147209 17 29430213 to 29430217 4 - TSS region transcription start site region 147209
Tssr147210 17 29430522 to 29430531 9 - TSS region transcription start site region 147210
Tssr147211 17 29430543 to 29430551 8 - TSS region transcription start site region 147211
Gm36486 17 29430798 to 29437448 6650 - lncRNA gene predicted gene, 36486
Tssr147212 17 29434675 to 29434694 19 - TSS region transcription start site region 147212
Tssr147213 17 29434708 to 29434721 13 - TSS region transcription start site region 147213
Gm36199 17 29434727 to 29466079 31352 + lncRNA gene predicted gene, 36199
Tssr147214 17 29435429 to 29435440 11 - TSS region transcription start site region 147214
Tssr147215 17 29435446 to 29435460 14 - TSS region transcription start site region 147215
Tssr147216 17 29436949 to 29436986 37 - TSS region transcription start site region 147216
Tssr147217 17 29437012 to 29437070 58 - TSS region transcription start site region 147217
Tssr147218 17 29437096 to 29437114 18 - TSS region transcription start site region 147218
Cpgi8919 17 29437100 to 29437559 459 CpG island CpG island 8919
Tssr147219 17 29437253 to 29437255 2 - TSS region transcription start site region 147219
Tssr147220 17 29437304 to 29437336 32 - TSS region transcription start site region 147220
Tssr143547 17 29440128 to 29440137 9 + TSS region transcription start site region 143547
Tssr147221 17 29443846 to 29443861 15 - TSS region transcription start site region 147221