Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:29104110-29274122

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr143514 17 29114142 to 29114202 60 + TSS region transcription start site region 143514
Rab44 17 29114145 to 29148980 34835 + protein coding gene RAB44, member RAS oncogene family
Tssr143515 17 29114500 to 29114504 4 + TSS region transcription start site region 143515
Tssr143516 17 29135409 to 29135434 25 + TSS region transcription start site region 143516
Rpl35a-ps3 17 29136972 to 29137304 332 - pseudogene ribosomal protein L35A, pseudogene 3
Tssr143517 17 29142321 to 29142323 2 + TSS region transcription start site region 143517
Tssr147184 17 29148975 to 29148989 14 - TSS region transcription start site region 147184
Gm18271 17 29154480 to 29155277 797 + pseudogene predicted gene, 18271
Cpgi8909 17 29156495 to 29156716 221 CpG island CpG island 8909
Cpne5 17 29156521 to 29238118 81597 - protein coding gene copine V
Tssr147185 17 29167442 to 29167461 19 - TSS region transcription start site region 147185
D17Mit145 17 29187447 to 29187550 103 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 145
Tssr147186 17 29189091 to 29189107 16 - TSS region transcription start site region 147186
Tssr147187 17 29189110 to 29189122 12 - TSS region transcription start site region 147187
Gm50054 17 29223296 to 29223441 145 + unclassified gene predicted gene, 50054
Tammq8 17 29232813 to 29232813 0 QTL tibialis anterior muscle mass QTL 8
Cpgi8910 17 29237220 to 29239186 1966 CpG island CpG island 8910
Tssr147188 17 29237776 to 29237827 51 - TSS region transcription start site region 147188
Tssr147189 17 29238070 to 29238083 13 - TSS region transcription start site region 147189
Tssr147190 17 29238089 to 29238166 77 - TSS region transcription start site region 147190
Tssr147191 17 29238206 to 29238252 46 - TSS region transcription start site region 147191
Gm41557 17 29241034 to 29243885 2851 + lncRNA gene predicted gene, 41557
D17Mit227 17 29242568 to 29242677 109 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 227
Ppil1 17 29250835 to 29263971 13136 - protein coding gene peptidylprolyl isomerase (cyclophilin)-like 1
Tssr147192 17 29261968 to 29261981 13 - TSS region transcription start site region 147192
Cpgi8911 17 29263643 to 29264454 811 CpG island CpG island 8911
Tssr147193 17 29263906 to 29263913 7 - TSS region transcription start site region 147193
Tssr147194 17 29263928 to 29263982 54 - TSS region transcription start site region 147194
Gm50068 17 29263999 to 29265208 1209 + antisense lncRNA gene predicted gene, 50068
Tssr147195 17 29264115 to 29264146 31 - TSS region transcription start site region 147195
D17Mit101 17 29268308 to 29268449 141 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 101
Phl1 17 29268449 to 7657011 -21611438 QTL progressive hearing loss 1
Cpgi8912 17 29268718 to 29269495 777 CpG island CpG island 8912
BC004004 17 29268788 to 29302887 34099 + protein coding gene cDNA sequence BC004004
Tssr143518 17 29268818 to 29268829 11 + TSS region transcription start site region 143518
Tssr143519 17 29268891 to 29268902 11 + TSS region transcription start site region 143519
Tssr143520 17 29268908 to 29268974 66 + TSS region transcription start site region 143520
Tssr143521 17 29274078 to 29274129 51 + TSS region transcription start site region 143521