Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:29037474-29099126

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Srsf3 17 29032660 to 29043372 10712 + protein coding gene serine/arginine-rich splicing factor 3
Tssr143491 17 29040991 to 29041002 11 + TSS region transcription start site region 143491
Tssr143492 17 29047215 to 29047218 3 + TSS region transcription start site region 143492
Tssr147169 17 29052029 to 29052057 28 - TSS region transcription start site region 147169
Gm41556 17 29055539 to 29059553 4014 + lincRNA gene predicted gene, 41556
Tssr147170 17 29056739 to 29056743 4 - TSS region transcription start site region 147170
Trp53cor1 17 29057474 to 29079126 21652 - lincRNA gene tumor protein p53 pathway corepressor 1
Gm27599 17 29059744 to 29059917 173 + unclassified non-coding RNA gene predicted gene, 27599
Tssr147171 17 29078832 to 29078841 9 - TSS region transcription start site region 147171
Tssr147172 17 29078926 to 29078944 18 - TSS region transcription start site region 147172
Tssr147173 17 29078953 to 29078972 19 - TSS region transcription start site region 147173
Tssr147174 17 29078982 to 29078994 12 - TSS region transcription start site region 147174
Tssr147175 17 29079023 to 29079041 18 - TSS region transcription start site region 147175
Tssr147176 17 29079060 to 29079075 15 - TSS region transcription start site region 147176
Tssr147177 17 29079094 to 29079133 39 - TSS region transcription start site region 147177
Tssr147178 17 29080822 to 29080856 34 - TSS region transcription start site region 147178
Tssr143493 17 29081576 to 29081587 11 + TSS region transcription start site region 143493
Tssr143494 17 29090695 to 29090725 30 + TSS region transcription start site region 143494
Tssr147179 17 29090851 to 29090876 25 - TSS region transcription start site region 147179
Tssr147180 17 29090883 to 29090894 11 - TSS region transcription start site region 147180
Tssr143495 17 29090969 to 29091020 51 + TSS region transcription start site region 143495
Cdkn1a 17 29090979 to 29100722 9743 + protein coding gene cyclin-dependent kinase inhibitor 1A (P21)
Tssr143496 17 29091118 to 29091125 7 + TSS region transcription start site region 143496
1700023B13Rik 17 29093416 to 29094461 1045 - unclassified gene RIKEN cDNA 1700023B13 gene
Cpgi8907 17 29093517 to 29095813 2296 CpG island CpG island 8907
Tssr143497 17 29093763 to 29093781 18 + TSS region transcription start site region 143497
Tssr147181 17 29095409 to 29095416 7 - TSS region transcription start site region 147181
Cpgi8908 17 29098332 to 29098829 497 CpG island CpG island 8908
Tssr143498 17 29098580 to 29098592 12 + TSS region transcription start site region 143498
Tssr143499 17 29098599 to 29098645 46 + TSS region transcription start site region 143499
Tssr143500 17 29098729 to 29098740 11 + TSS region transcription start site region 143500
Tssr143501 17 29098757 to 29098815 58 + TSS region transcription start site region 143501