Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:28360071-28484390

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tulp1 17 28351515 to 28365143 13628 - protein coding gene tubby like protein 1
Tssr147109 17 28361778 to 28361792 14 - TSS region transcription start site region 147109
Cpgi8880 17 28362646 to 28362879 233 CpG island CpG island 8880
Cpgi8881 17 28363182 to 28363384 202 CpG island CpG island 8881
Cpgi8882 17 28364137 to 28364667 530 CpG island CpG island 8882
Tssr147110 17 28364568 to 28364584 16 - TSS region transcription start site region 147110
Tssr147111 17 28364589 to 28364605 16 - TSS region transcription start site region 147111
Tssr147112 17 28365110 to 28365136 26 - TSS region transcription start site region 147112
Tssr147113 17 28365146 to 28365180 34 - TSS region transcription start site region 147113
Tssr147114 17 28365206 to 28365224 18 - TSS region transcription start site region 147114
Cpgi8883 17 28368603 to 28368817 214 CpG island CpG island 8883
Cpgi8884 17 28375582 to 28375857 275 CpG island CpG island 8884
Cpgi8885 17 28386277 to 28386735 458 CpG island CpG island 8885
Cpgi8886 17 28391761 to 28392002 241 CpG island CpG island 8886
Fkbp5 17 28398753 to 28486149 87396 - protein coding gene FK506 binding protein 5
Tssr143432 17 28412475 to 28412477 2 + TSS region transcription start site region 143432
6030422H21Rik 17 28420071 to 28424390 4319 unclassified gene RIKEN cDNA 6030422H21 gene
Gm49838 17 28424723 to 28426430 1707 - sense intronic lncRNA gene predicted gene, 49838
Tssr147115 17 28438032 to 28438047 15 - TSS region transcription start site region 147115
Tssr147116 17 28438050 to 28438061 11 - TSS region transcription start site region 147116
Tssr147117 17 28441374 to 28441387 13 - TSS region transcription start site region 147117
Tssr147118 17 28441689 to 28441706 17 - TSS region transcription start site region 147118
Tssr147119 17 28441718 to 28441732 14 - TSS region transcription start site region 147119
Gm22146 17 28446599 to 28455602 9003 + antisense lncRNA gene predicted gene, 22146
Gm49799 17 28446861 to 28447148 287 + unclassified non-coding RNA gene predicted gene, 49799
Tssr147120 17 28452029 to 28452034 5 - TSS region transcription start site region 147120
Tssr147121 17 28455648 to 28455651 3 - TSS region transcription start site region 147121
Gm49839 17 28457484 to 28461095 3611 - unclassified gene predicted gene, 49839
Tssr147122 17 28467272 to 28467276 4 - TSS region transcription start site region 147122