MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:28082182-28202193

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi8866	17	28084943 to 28085131	188		CpG island	CpG island 8866
Tssr143387	17	28098016 to 28098018	2	+	TSS region	transcription start site region 143387
Cpgi8867	17	28105399 to 28105819	420		CpG island	CpG island 8867
Tssr143388	17	28124037 to 28124044	7	+	TSS region	transcription start site region 143388
D17Mit226	17	28128659 to 28128772	113		DNA segment	DNA Segment, Chr 17, Massachusetts Institute of Technology 226
Cpgi8868	17	28133340 to 28133529	189		CpG island	CpG island 8868
Gm49897	17	28139628 to 28140106	478	-	unclassified gene	predicted gene, 49897
Cpgi8869	17	28141247 to 28143138	1891		CpG island	CpG island 8869
Scube3	17	28142141 to 28174854	32713	+	protein coding gene	signal peptide, CUB domain, EGF-like 3
Tssr143389	17	28142182 to 28142193	11	+	TSS region	transcription start site region 143389
Tssr143390	17	28142267 to 28142321	54	+	TSS region	transcription start site region 143390
Tssr143391	17	28147540 to 28147544	4	+	TSS region	transcription start site region 143391
C230013L11Rik	17	28174657 to 28177682	3025	-	bidirectional promoter lncRNA gene	RIKEN cDNA C230013L11 gene
Cpgi8870	17	28176551 to 28177952	1401		CpG island	CpG island 8870
Zfp523	17	28177129 to 28205886	28757	+	protein coding gene	zinc finger protein 523
Tssr143392	17	28177130 to 28177214	84	+	TSS region	transcription start site region 143392
Tssr143393	17	28177396 to 28177449	53	+	TSS region	transcription start site region 143393
Tssr147097	17	28177641 to 28177682	41	-	TSS region	transcription start site region 147097