MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:27920108-28020117

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr5054	17	27935115 to 27935124	9	-	TSS region	transcription start site region 5054
Gm15597	17	27959615 to 27965316	5701	-	antisense lncRNA gene	predicted gene 15597
Tssr147080	17	27970108 to 27970117	9	-	TSS region	transcription start site region 147080
Tssr143373	17	27979066 to 27979090	24	+	TSS region	transcription start site region 143373
Gm49802	17	27982392 to 27983158	766	+	sense intronic lncRNA gene	predicted gene, 49802
Cpgi8861	17	27986116 to 27986453	337		CpG island	CpG island 8861
Gm35290	17	28001065 to 28002362	1297	-	antisense lncRNA gene	predicted gene, 35290
Tssr143374	17	28007346 to 28007409	63	+	TSS region	transcription start site region 143374
Tssr143375	17	28007471 to 28007502	31	+	TSS region	transcription start site region 143375
Tssr143376	17	28007521 to 28007540	19	+	TSS region	transcription start site region 143376
Tssr143377	17	28007582 to 28007596	14	+	TSS region	transcription start site region 143377
Tssr143378	17	28007648 to 28007694	46	+	TSS region	transcription start site region 143378
Tssr143379	17	28007695 to 28007704	9	+	TSS region	transcription start site region 143379
Tssr143380	17	28007991 to 28008028	37	+	TSS region	transcription start site region 143380
Cpgi8862	17	28008194 to 28008379	185		CpG island	CpG island 8862
Tssr143381	17	28008279 to 28008307	28	+	TSS region	transcription start site region 143381
Tssr147081	17	28008552 to 28008580	28	-	TSS region	transcription start site region 147081
Cpgi8863	17	28015316 to 28015580	264		CpG island	CpG island 8863