Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27203316-27423696

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lemd2 17 27189601 to 27204438 14837 - protein coding gene LEM domain containing 2
Cpgi8838 17 27203292 to 27204970 1678 CpG island CpG island 8838
Tssr143313 17 27203299 to 27203316 17 + TSS region transcription start site region 143313
Tssr143314 17 27203341 to 27203346 5 + TSS region transcription start site region 143314
Tssr147013 17 27204357 to 27204447 90 - TSS region transcription start site region 147013
Tssr147014 17 27204450 to 27204477 27 - TSS region transcription start site region 147014
Gm34736 17 27204515 to 27213810 9295 + lncRNA gene predicted gene, 34736
9630028I04Rik 17 27235075 to 27248066 12991 - lncRNA gene RIKEN cDNA 9630028I04 gene
Tssr147015 17 27242625 to 27242680 55 - TSS region transcription start site region 147015
Tssr147016 17 27245066 to 27245076 10 - TSS region transcription start site region 147016
Gm49793 17 27308316 to 27318696 10380 - lincRNA gene predicted gene, 49793
Mir7214 17 27317035 to 27317095 60 - miRNA gene microRNA 7214
Tssr147017 17 27323182 to 27323193 11 - TSS region transcription start site region 147017
Tssr147018 17 27323320 to 27323361 41 - TSS region transcription start site region 147018
4930556A12Rik 17 27323910 to 27325052 1142 unclassified gene RIKEN cDNA 4930556A12 gene
Tssr147019 17 27325023 to 27325034 11 - TSS region transcription start site region 147019
Gm10505 17 27325035 to 27344833 19798 + lincRNA gene predicted gene 10505
Tssr147020 17 27325048 to 27325056 8 - TSS region transcription start site region 147020
Cpgi8839 17 27325076 to 27325834 758 CpG island CpG island 8839
Tssr143315 17 27325194 to 27325198 4 + TSS region transcription start site region 143315
4930442P07Rik 17 27325353 to 27327009 1656 unclassified gene RIKEN cDNA 4930442P07 gene
Tssr143316 17 27325355 to 27325360 5 + TSS region transcription start site region 143316
Tssr143317 17 27325381 to 27325386 5 + TSS region transcription start site region 143317
Tssr143318 17 27325388 to 27325400 12 + TSS region transcription start site region 143318
Mir7216 17 27328385 to 27328460 75 + miRNA gene microRNA 7216
Tssr143319 17 27342453 to 27342470 17 + TSS region transcription start site region 143319
Gm49795 17 27353861 to 27354668 807 - lincRNA gene predicted gene, 49795
Gm49794 17 27354111 to 27367492 13381 + lincRNA gene predicted gene, 49794
Tssr5051 17 27354800 to 27354803 3 + TSS region transcription start site region 5051
Mir7217 17 27355738 to 27355799 61 + miRNA gene microRNA 7217
Mir7218 17 27358097 to 27358155 58 + miRNA gene microRNA 7218
Tssr147021 17 27364470 to 27364487 17 - TSS region transcription start site region 147021
Gm35007 17 27397020 to 27398874 1854 - lncRNA gene predicted gene, 35007
Tssr143320 17 27398135 to 27398183 48 + TSS region transcription start site region 143320
Gm49796 17 27398147 to 27399221 1074 + lincRNA gene predicted gene, 49796
Tssr143321 17 27398212 to 27398215 3 + TSS region transcription start site region 143321
Grm4 17 27422387 to 27513678 91291 - protein coding gene glutamate receptor, metabotropic 4