Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:26968041-27028050

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(17D17Jcs41-D17Jcs15)8Jcs 17 25022791 to 27025780 2002989 chromosomal deletion deletion, Chr 17, John C Schimenti 8
Syngap1 17 26941408 to 26972434 31026 + protein coding gene synaptic Ras GTPase activating protein 1 homolog (rat)
Tssr143290 17 26970987 to 26970994 7 + TSS region transcription start site region 143290
Tssr143291 17 26971798 to 26971823 25 + TSS region transcription start site region 143291
Tssr143292 17 26971975 to 26971978 3 + TSS region transcription start site region 143292
Tssr143293 17 26972251 to 26972266 15 + TSS region transcription start site region 143293
Tssr143294 17 26972372 to 26972381 9 + TSS region transcription start site region 143294
Cpgi8829 17 26972536 to 26973922 1386 CpG island CpG island 8829
Tssr146986 17 26973027 to 26973052 25 - TSS region transcription start site region 146986
Tssr143295 17 26973161 to 26973219 58 + TSS region transcription start site region 143295
Zbtb9 17 26973179 to 26976203 3024 + protein coding gene zinc finger and BTB domain containing 9
Tssr143296 17 26998041 to 26998050 9 + TSS region transcription start site region 143296
Cpgi8830 17 27017921 to 27018297 376 CpG island CpG island 8830
Tssr143297 17 27017992 to 27018003 11 + TSS region transcription start site region 143297
Tssr143298 17 27018005 to 27018067 62 + TSS region transcription start site region 143298
Ggnbp1 17 27018035 to 27036378 18343 + protein coding gene gametogenetin binding protein 1
Bak1 17 27019812 to 27028839 9027 - protein coding gene BCL2-antagonist/killer 1
Tssr146987 17 27020623 to 27020643 20 - TSS region transcription start site region 146987
Tssr146988 17 27020655 to 27020682 27 - TSS region transcription start site region 146988
Tssr146989 17 27020830 to 27020871 41 - TSS region transcription start site region 146989
Tssr146990 17 27021230 to 27021267 37 - TSS region transcription start site region 146990
Tssr146991 17 27021272 to 27021304 32 - TSS region transcription start site region 146991
D17Jcs15 17 27025541 to 27025780 239 DNA segment DNA segment, Chr 17, John C. Schimenti 15