Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25682188-25752213

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930541O19Rik 17 25665376 to 25698911 33535 unclassified gene RIKEN cDNA 4930541O19 gene
D17Jcs47 17 25690475 to 25690702 227 DNA segment DNA segment, Chr 17, John C. Schimenti 47
Gm22645 17 25694114 to 25694220 106 - snRNA gene predicted gene, 22645
Gm5836 17 25705049 to 25705819 770 + pseudogene predicted gene 5836
Cpgi8773 17 25716740 to 25718130 1390 CpG island CpG island 8773
Gng13 17 25717172 to 25719102 1930 + protein coding gene guanine nucleotide binding protein (G protein), gamma 13
Tssr143169 17 25717188 to 25717213 25 + TSS region transcription start site region 143169
Tssr143170 17 25717214 to 25717236 22 + TSS region transcription start site region 143170
Tssr143171 17 25717489 to 25717551 62 + TSS region transcription start site region 143171
Tssr143172 17 25718225 to 25718231 6 + TSS region transcription start site region 143172
Chtf18 17 25719030 to 25727438 8408 - protein coding gene CTF18, chromosome transmission fidelity factor 18
Cpgi8774 17 25726877 to 25727835 958 CpG island CpG island 8774
Tssr146846 17 25727344 to 25727363 19 - TSS region transcription start site region 146846
Tssr146847 17 25727364 to 25727426 62 - TSS region transcription start site region 146847
Tssr143173 17 25727726 to 25727797 71 + TSS region transcription start site region 143173
Rpusd1 17 25727751 to 25731456 3705 + protein coding gene RNA pseudouridylate synthase domain containing 1
Opfaq5 17 25731951 to 28773124 3041173 QTL open field activity QTL 5
Mslnl 17 25736040 to 25748330 12290 + protein coding gene mesothelin-like
Tssr5040 17 25736214 to 25736240 26 + TSS region transcription start site region 5040
Gm25083 17 25746788 to 25746879 91 - miRNA gene predicted gene, 25083
Tssr143174 17 25748613 to 25748622 9 + TSS region transcription start site region 143174
Msln 17 25748614 to 25754327 5713 - protein coding gene mesothelin
Tssr146848 17 25751113 to 25751132 19 - TSS region transcription start site region 146848
Tssr146849 17 25751522 to 25751568 46 - TSS region transcription start site region 146849