Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25223390-25323443

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Unkl 17 25188397 to 25234443 46046 + protein coding gene unkempt family like zinc finger
Tssr146821 17 25224693 to 25224701 8 - TSS region transcription start site region 146821
Tssr143146 17 25228176 to 25228186 10 + TSS region transcription start site region 143146
Gnptg 17 25234317 to 25240170 5853 - protein coding gene N-acetylglucosamine-1-phosphotransferase, gamma subunit
Cpgi8759 17 25239688 to 25240744 1056 CpG island CpG island 8759
Tssr146822 17 25240112 to 25240158 46 - TSS region transcription start site region 146822
Tssr143147 17 25240166 to 25240220 54 + TSS region transcription start site region 143147
Tsr3 17 25240170 to 25242798 2628 + protein coding gene TSR3 20S rRNA accumulation
Tssr143148 17 25240225 to 25240245 20 + TSS region transcription start site region 143148
Baiap3 17 25242659 to 25256364 13705 - protein coding gene BAI1-associated protein 3
Mir3547 17 25245551 to 25245638 87 - miRNA gene microRNA 3547
Tssr146823 17 25248132 to 25248150 18 - TSS region transcription start site region 146823
Cpgi8760 17 25248328 to 25248563 235 CpG island CpG island 8760
Cpgi8761 17 25255514 to 25256752 1238 CpG island CpG island 8761
Tssr146824 17 25256274 to 25256293 19 - TSS region transcription start site region 146824
Ube2i 17 25261916 to 25274622 12706 - protein coding gene ubiquitin-conjugating enzyme E2I
Cpgi8762 17 25272888 to 25274405 1517 CpG island CpG island 8762
Tssr146825 17 25273254 to 25273265 11 - TSS region transcription start site region 146825
Tssr146826 17 25273289 to 25273301 12 - TSS region transcription start site region 146826
Tssr146827 17 25273366 to 25273383 17 - TSS region transcription start site region 146827
Tssr146828 17 25273390 to 25273443 53 - TSS region transcription start site region 146828
Tssr146829 17 25273506 to 25273526 20 - TSS region transcription start site region 146829
Tssr146830 17 25273541 to 25273557 16 - TSS region transcription start site region 146830
Tssr146831 17 25273562 to 25273638 76 - TSS region transcription start site region 146831
Tssr146832 17 25273799 to 25273855 56 - TSS region transcription start site region 146832
Tssr146833 17 25273861 to 25273886 25 - TSS region transcription start site region 146833
Gm17801 17 25274124 to 25275528 1404 + lncRNA gene predicted gene, 17801
Tssr146834 17 25274275 to 25274296 21 - TSS region transcription start site region 146834
Tssr146835 17 25274299 to 25274317 18 - TSS region transcription start site region 146835
Tssr143149 17 25274363 to 25274396 33 + TSS region transcription start site region 143149
Tssr143150 17 25298389 to 25298403 14 + TSS region transcription start site region 143150
Prss34 17 25298394 to 25300165 1771 + protein coding gene protease, serine 34
Gm25921 17 25306112 to 25306248 136 + snoRNA gene predicted gene, 25921
Tssr143151 17 25308642 to 25308647 5 + TSS region transcription start site region 143151
Prss28 17 25308646 to 25311876 3230 + protein coding gene protease, serine 28
Tssr5038 17 25317560 to 25317586 26 + TSS region transcription start site region 5038
Tssr143152 17 25318649 to 25318657 8 + TSS region transcription start site region 143152
Prss29 17 25318654 to 25322684 4030 + protein coding gene protease, serine 29
D17Mit26 17 25319036 to 25319178 142 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 26
D17Aus126 17 25319044 to 25319138 94 DNA segment DNA segment, Chr 17, Austin 126